RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 LEMD2Q8NC56 503 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 SPATA32Q96LK8 384 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 MTMR12Q9C0I1 747 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 ZCWPW1Q9H0M4 648 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 AGPAT3Q9NRZ7 376 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 SERTAD1Q9UHV2 236 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 AGAP1Q9UPQ3 857 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 SLC27A5Q9Y2P5 690 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 ZNF233A6NK53 670 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 TMEM191BP0C7N4 346 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 MYL4P12829 197 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 PFKFB1P16118 471 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 CMA1P23946 247 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 GPC5P78333 572 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 BMT2Q1RMZ1 405 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 SLC39A12Q504Y0 691 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 NELFCDQ8IXH7 590 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 THEM5Q8N1Q8 247 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 LRRC52Q8N7C0 313 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 TBC1D17Q9HA65 648 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 KIAA1586Q9HCI6 787 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 HSFX1Q9UBD0 423 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 SIX4Q9UIU6 781 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 MIA3Q5JRA6 1907 aa20.39■□□□□ 0.85
COL5A1-203ENST00000460264 COL4A3Q01955 1670 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 A0A1B0GVL5 298 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 PI15O43692 258 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 MOSPD3O75425 235 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 ECI2O75521 394 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 FCARP24071 287 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 ALDH1A3P47895 512 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 EPHB3P54753 998 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 LMBRD2Q68DH5 695 aaPredicted RBP20.38■□□□□ 0.85
COL5A1-203ENST00000460264 TMC8Q8IU68 726 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 CSGALNACT2Q8N6G5 542 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 LRRC3Q9BY71 257 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 SLC39A2Q9NP94 309 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 INTS13Q9NVM9 706 aa20.38■□□□□ 0.85
COL5A1-203ENST00000460264 NUP210Q8TEM1 1887 aaPredicted RBP20.37■□□□□ 0.85
COL5A1-203ENST00000460264 SOAT2O75908 522 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 KRT19P08727 400 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 GJA1P17302 382 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 RFX1P22670 979 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 SNRPFP62306 86 aaKnown RBP20.37■□□□□ 0.85
COL5A1-203ENST00000460264 BFSP1Q12934 665 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 SURF1Q15526 300 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 SNRNP35Q16560 246 aaKnown RBP20.37■□□□□ 0.85
COL5A1-203ENST00000460264 FAM78AQ5JUQ0 283 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 PDCL2Q8N4E4 241 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 OR5B17Q8NGF7 314 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 SHKBP1Q8TBC3 707 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 PAGE5Q96GU1 130 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 ANKRD36BP1Q96IX9 119 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 ASB16Q96NS5 453 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 GDAP2Q9NXN4 497 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 L1RE1Q9UN81 338 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 HPSEQ9Y251 543 aa20.37■□□□□ 0.85
COL5A1-203ENST00000460264 COL4A2P08572 1712 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 KLRC4O43908 158 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 CDR1P51861 262 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 RBP5P82980 135 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 SMARCB1Q12824 385 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 TANGO2Q6ICL3 276 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 PHLDB3Q6NSJ2 640 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 HS2ST1Q7LGA3 356 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 LRRTM3Q86VH5 581 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 WDR49Q8IV35 697 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 C2orf15Q8WU43 125 aaKnown RBP20.36■□□□□ 0.85
COL5A1-203ENST00000460264 PSMG2Q969U7 264 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 ELSPBP1Q96BH3 223 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 ZSWIM3Q96MP5 696 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 PHOX2BQ99453 314 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 SEPT5Q99719 369 aaPredicted RBP20.36■□□□□ 0.85
COL5A1-203ENST00000460264 PLA2G2FQ9BZM2 168 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 USP25Q9UHP3 1055 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 ASB3Q9Y575 518 aa20.36■□□□□ 0.85
COL5A1-203ENST00000460264 DENND4CQ5VZ89 1909 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 STK25O00506 426 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 CLIC2O15247 247 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 HUS1O60921 280 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 TNNC2P02585 160 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 ATF6P18850 670 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 CYP2J2P51589 502 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 TEAD2Q15562 447 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 DUOXA2Q1HG44 320 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 MGAT5BQ3V5L5 792 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 CCDC105Q8IYK2 499 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 TMEM86AQ8N2M4 240 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 XXYLT1Q8NBI6 393 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 SPPL2BQ8TCT7 592 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 SMARCD2Q92925 531 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 IRF2BPLQ9H1B7 796 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 ZNF334Q9HCZ1 680 aaPredicted RBP20.35■□□□□ 0.85
COL5A1-203ENST00000460264 EXOC1Q9NV70 894 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 ABI2Q9NYB9 513 aaPredicted RBP20.35■□□□□ 0.85
COL5A1-203ENST00000460264 ATP6V1DQ9Y5K8 247 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 SNX9Q9Y5X1 595 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 TICRRQ7Z2Z1 1910 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 OBSL1O75147 1896 aa20.35■□□□□ 0.85
COL5A1-203ENST00000460264 A0A1W2PRU2 124 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms