RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 FEZF2Q8TBJ5 459 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 GPT2Q8TD30 523 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 NELFBQ8WX92 580 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 HPDLQ96IR7 371 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 GZF1Q9H116 711 aaPredicted RBP10.85□□□□□ -0.67
RFX3-210ENST00000457373 S1PR5Q9H228 398 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 DPP7Q9UHL4 492 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 CDH22Q9UJ99 828 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 CTNND2Q9UQB3 1225 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 FAM50BQ9Y247 325 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 USP15Q9Y4E8 981 aaPredicted RBP10.85□□□□□ -0.67
RFX3-210ENST00000457373 SNX9Q9Y5X1 595 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 CHD9Q3L8U1 2897 aa10.85□□□□□ -0.67
RFX3-210ENST00000457373 TSC2P49815 1807 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 CCDC195A0A1B0GUA6 201 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 WDR27A2RRH5 827 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 MAPK13O15264 365 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 TBC1D4O60343 1298 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 HUS1O60921 280 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 RFPL2O75678 378 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 OAZ2O95190 189 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 C4BPAP04003 597 aaKnown RBP10.84□□□□□ -0.67
RFX3-210ENST00000457373 OR4Q2P0C623 313 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 TRIM49P0CI25 452 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 TRIM49CP0CI26 452 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 CPB1P15086 417 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 ELF1P32519 619 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 AP3M2P53677 418 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 FKBP3Q00688 224 aaKnown RBP10.84□□□□□ -0.67
RFX3-210ENST00000457373 WSCD1Q658N2 575 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 SLC8B1Q6J4K2 584 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 INTS8Q75QN2 995 aaKnown RBP10.84□□□□□ -0.67
RFX3-210ENST00000457373 THEM5Q8N1Q8 247 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 SMRP1Q8NCR6 262 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 HDAC7Q8WUI4 952 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 KHSRPQ92945 711 aaKnown RBP eCLIP10.84□□□□□ -0.673e-11■■■■■ 27.7
RFX3-210ENST00000457373 NECAB3Q96P71 396 aaPredicted RBP10.84□□□□□ -0.67
RFX3-210ENST00000457373 TMEM209Q96SK2 561 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 ADAM7Q9H2U9 754 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 PLEKHA4Q9H4M7 779 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 SFXN1Q9H9B4 322 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 FBXW11Q9UKB1 542 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 DSEQ9UL01 958 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 L1RE1Q9UN81 338 aa10.84□□□□□ -0.67
RFX3-210ENST00000457373 C2orf16Q68DN1 1984 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 LAMA2P24043 3122 aaKnown RBP10.83□□□□□ -0.68
RFX3-210ENST00000457373 C1RP00736 705 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 CYP11A1P05108 521 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 C8AP07357 584 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 EPB41P11171 864 aaKnown RBP10.83□□□□□ -0.68
RFX3-210ENST00000457373 CDR1P51861 262 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 MYL6P60660 151 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 LRRC63Q05C16 580 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 ITIH3Q06033 890 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 PAK1Q13153 545 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 SMAD2Q15796 467 aaKnown RBP10.83□□□□□ -0.68
RFX3-210ENST00000457373 QPCTQ16769 361 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 PPM1LQ5SGD2 360 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 ATAT1Q5SQI0 421 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 LIN9Q5TKA1 542 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 TCERG1LQ5VWI1 586 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 TDRD10Q5VZ19 366 aaKnown RBP10.83□□□□□ -0.68
RFX3-210ENST00000457373 RNF19BQ6ZMZ0 732 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 ZNF461Q8TAF7 563 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 ADAMTS19Q8TE59 1207 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 ELMO3Q96BJ8 720 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 PGLYRP2Q96PD5 576 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 MMS19Q96T76 1030 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 DUSP9Q99956 384 aaKnown RBP10.83□□□□□ -0.68
RFX3-210ENST00000457373 MKNK1Q9BUB5 465 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 PIDD1Q9HB75 910 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 CYP4F11Q9HBI6 524 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 GDAP2Q9NXN4 497 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 CHD7Q9P2D1 2997 aa10.83□□□□□ -0.68
RFX3-210ENST00000457373 BICDL2A1A5D9 508 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 OR6C75A6NL08 312 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 POM121CA8CG34 1229 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 C3orf80F5H4A9 247 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 IKBKBO14920 756 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 ABLIM3O94929 683 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 SEC24AO95486 1093 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 VNN1O95497 513 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 COL9A1P20849 921 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 ATICP31939 592 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 MTHFRP42898 656 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 GCLMP48507 274 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 CLDN10P78369 228 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 PPP3CAQ08209 521 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 ADCY1Q08828 1119 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 CBX2Q14781 532 aaPredicted RBP10.82□□□□□ -0.68
RFX3-210ENST00000457373 WDR72Q3MJ13 1102 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 CCDC40Q4G0X9 1142 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 DCAF17Q5H9S7 520 aaPredicted RBP10.82□□□□□ -0.68
RFX3-210ENST00000457373 C1orf220Q5T0J3 134 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 TTI2Q6NXR4 508 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 SV2AQ7L0J3 742 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 FILIP1Q7Z7B0 1213 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 GPR149Q86SP6 731 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 OSTM1Q86WC4 334 aa10.82□□□□□ -0.68
RFX3-210ENST00000457373 PDCL2Q8N4E4 241 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms