RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 PPM1FP49593 454 aaPredicted RBP5.24□□□□□ -1.57
LINC00393-202ENST00000452852 SLC16A1P53985 500 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 IL10RAQ13651 578 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 CNN3Q15417 329 aaKnown RBP5.24□□□□□ -1.57
LINC00393-202ENST00000452852 USP39Q53GS9 565 aaKnown RBP5.24□□□□□ -1.57
LINC00393-202ENST00000452852 CCDC178Q5BJE1 867 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 SWSAP1Q6NVH7 229 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 LMBR1LQ6UX01 489 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 OR14C36Q8NHC7 312 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 EXTL1Q92935 676 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 KAT5Q92993 513 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 PGBD4Q96DM1 585 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 SGCZQ96LD1 299 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 HERPUD2Q9BSE4 406 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 CDK19Q9BWU1 502 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 LUZP4Q9P127 313 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 IPPQ9Y573 584 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 THSD7AQ9UPZ6 1657 aa5.24□□□□□ -1.57
LINC00393-202ENST00000452852 LRP5O75197 1615 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 TRPM1Q7Z4N2 1603 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 A0A1W2PR48 441 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 CAPN8A6NHC0 703 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 GOLIM4O00461 696 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 DTNBO60941 627 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 AMHP03971 560 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 PEX2P28328 305 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 TM4SF4P48230 202 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 NPEPPSP55786 919 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 NRG3P56975 720 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 ZXDAP98168 799 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 TRIM14Q14142 442 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 NRN1LQ496H8 165 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 TAS1R1Q7RTX1 841 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 DEFB132Q7Z7B7 95 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 GLB1L2Q8IW92 636 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 MSL3Q8N5Y2 521 aaKnown RBP5.23□□□□□ -1.57
LINC00393-202ENST00000452852 RIPOR3Q96MK2 946 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 NAP1L4Q99733 375 aaKnown RBP5.23□□□□□ -1.57
LINC00393-202ENST00000452852 DMRT3Q9NQL9 472 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 CDY2AQ9Y6F7 541 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 KIAA0232Q92628 1395 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 NRKQ7Z2Y5 1582 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 AKAP12Q02952 1782 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 PPIP5K1Q6PFW1 1433 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 ACEP12821 1306 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 SPATA31A5Q5VU36 1347 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 SPATA31A7Q8IWB4 1347 aa5.23□□□□□ -1.57
LINC00393-202ENST00000452852 CENPJQ9HC77 1338 aaPredicted RBP5.23□□□□□ -1.57
LINC00393-202ENST00000452852 POLR3AO14802 1390 aaPredicted RBP5.22□□□□□ -1.57
LINC00393-202ENST00000452852 CFAP69A5D8W1 941 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 STC2O76061 302 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 GSPT1P15170 499 aaKnown RBP5.22□□□□□ -1.57
LINC00393-202ENST00000452852 ACRV1P26436 265 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 CASRP41180 1078 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 PRIM2P49643 509 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 AGFG1P52594 562 aaKnown RBP5.22□□□□□ -1.57
LINC00393-202ENST00000452852 POU5F1BQ06416 359 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 IFIT5Q13325 482 aaKnown RBP5.22□□□□□ -1.57
LINC00393-202ENST00000452852 SPIDRQ14159 915 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 ELAVL1Q15717 326 aaKnown RBP5.22□□□□□ -1.57
LINC00393-202ENST00000452852 NBPF8Q3BBV2 869 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 TUBB8Q3ZCM7 444 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 ANO6Q4KMQ2 910 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 FKBP15Q5T1M5 1219 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 RNF207Q6ZRF8 634 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 TICAM2Q86XR7 235 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 SMAP1Q8IYB5 467 aaPredicted RBP5.22□□□□□ -1.57
LINC00393-202ENST00000452852 CPXCR1Q8N123 301 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 ANKRD35Q8N283 1001 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 PAF1Q8N7H5 531 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 LRTOMTQ8WZ04 291 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 ARL8AQ96BM9 186 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 MIEF2Q96C03 454 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 NT5C1BQ96P26 610 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 CRB3Q9BUF7 120 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 ZNF747Q9BV97 191 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 VPS11Q9H270 941 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 ARMT1Q9H993 441 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 CASS4Q9NQ75 786 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 TRMT13Q9NUP7 481 aaKnown RBP5.22□□□□□ -1.57
LINC00393-202ENST00000452852 PCDHA13Q9Y5I0 950 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 NR2E3Q9Y5X4 410 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 WNK3Q9BYP7 1800 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 PARP4Q9UKK3 1724 aaKnown RBP5.22□□□□□ -1.57
LINC00393-202ENST00000452852 SPATA31A1Q5TZJ5 1347 aa5.22□□□□□ -1.57
LINC00393-202ENST00000452852 RGPD5Q99666 1765 aa5.21□□□□□ -1.57
LINC00393-202ENST00000452852 KPNA5O15131 536 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 CD53P19397 219 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 MAP2K6P52564 334 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 CACNB3P54284 484 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 DSC2Q02487 901 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 MALLQ13021 153 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 UBE3CQ15386 1083 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 ADRM1Q16186 407 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 CCDC174Q6PII3 467 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 Q6ZRM9 215 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 DAAM2Q86T65 1068 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 ZNF354CQ86Y25 554 aa5.21□□□□□ -1.58
LINC00393-202ENST00000452852 MYLK4Q86YV6 388 aaPredicted RBP5.21□□□□□ -1.58
LINC00393-202ENST00000452852 C1orf210Q8IVY1 113 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms