RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 CTCFP49711 727 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-210ENST00000444502 SPIRE1Q08AE8 756 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 DEFB128Q7Z7B8 93 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 MYLK4Q86YV6 388 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-210ENST00000444502 RBBP8NLQ8NC74 664 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-210ENST00000444502 WNK4Q96J92 1243 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 RMI1Q9H9A7 625 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 XPNPEP3Q9NQH7 507 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 STARD7Q9NQZ5 370 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 WRAP73Q9P2S5 460 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-210ENST00000444502 FSBPO95073 299 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 GHRP10912 638 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 MUTP22033 750 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 PAPOLAP51003 745 aaKnown RBP11.16□□□□□ -0.62
TOP3B-210ENST00000444502 LAMTOR4Q0VGL1 99 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 SLMAPQ14BN4 828 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 LRRC14Q15048 493 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 TMED2Q15363 201 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 GLB1LQ6UWU2 654 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 NT5DC3Q86UY8 548 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 ATG4AQ8WYN0 398 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 ABTB1Q969K4 478 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-210ENST00000444502 ERP44Q9BS26 406 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 CARD9Q9H257 536 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 BATF3Q9NR55 127 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 INTUQ9ULD6 942 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 TADA2AO75478 443 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 ADRB2P07550 413 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 RBP5P82980 135 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 KRT17Q04695 432 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 NOTUMQ6P988 496 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 GPR142Q7Z601 462 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 FUKQ8N0W3 1084 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 RYBPQ8N488 228 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-210ENST00000444502 KLHL23Q8NBE8 558 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 REPS2Q8NFH8 660 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 ACSF2Q96CM8 615 aaPredicted RBP11.16□□□□□ -0.62
TOP3B-210ENST00000444502 EPN3Q9H201 632 aa11.16□□□□□ -0.62
TOP3B-210ENST00000444502 FAM187AA6NFU0 413 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 P4HA2O15460 535 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 ZNF280AP59817 542 aaPredicted RBP11.15□□□□□ -0.62
TOP3B-210ENST00000444502 SMAD1Q15797 465 aaKnown RBP11.15□□□□□ -0.62
TOP3B-210ENST00000444502 GRIK4Q16099 956 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 RASIP1Q5U651 963 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 SMC1BQ8NDV3 1235 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 ZSWIM2Q8NEG5 633 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 KRT35Q92764 455 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 ARHGEF37A1IGU5 675 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 CREB3O43889 395 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 CXCL8P10145 99 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 ELNP15502 786 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 RRM1P23921 792 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 GBP1P32455 592 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 NUMBP49757 651 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 PPP2R2AP63151 447 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 GEN1Q17RS7 908 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 HSDL1Q3SXM5 330 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 CEP128Q6ZU80 1094 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 NOP9Q86U38 636 aaKnown RBP11.15□□□□□ -0.62
TOP3B-210ENST00000444502 FBXO25Q8TCJ0 367 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 AENQ8WTP8 325 aaKnown RBP11.15□□□□□ -0.62
TOP3B-210ENST00000444502 CYFIP2Q96F07 1278 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 BTBD7Q9P203 1132 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 DBR1Q9UK59 544 aaKnown RBP11.15□□□□□ -0.62
TOP3B-210ENST00000444502 AJAP1Q9UKB5 411 aaPredicted RBP11.15□□□□□ -0.62
TOP3B-210ENST00000444502 PCDHB2Q9Y5E7 798 aa11.15□□□□□ -0.62
TOP3B-210ENST00000444502 OGTO15294 1046 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 PHF2O75151 1096 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 TOM1L1O75674 476 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 AKAP5P24588 427 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 SDC4P31431 198 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 PRKCIP41743 596 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 EIF3BP55884 814 aaKnown RBP11.15□□□□□ -0.63
TOP3B-210ENST00000444502 DARS2Q6PI48 645 aaKnown RBP11.15□□□□□ -0.63
TOP3B-210ENST00000444502 ZNF662Q6ZS27 426 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 PALB2Q86YC2 1186 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.15□□□□□ -0.63
TOP3B-210ENST00000444502 UBA3Q8TBC4 463 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 ACTRT1Q8TDG2 376 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 ZNF560Q96MR9 790 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 SAYSD1Q9NPB0 183 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 UVRAGQ9P2Y5 699 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 ATP11BQ9Y2G3 1177 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 PCDHA2Q9Y5H9 948 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 UBIAD1Q9Y5Z9 338 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 SCINQ9Y6U3 715 aa11.15□□□□□ -0.63
TOP3B-210ENST00000444502 EXTL3O43909 919 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 ALDH1A1P00352 501 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 NAMPTP43490 491 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 YWHAGP61981 247 aaKnown RBP eCLIP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 ITIH3Q06033 890 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 DHX34Q14147 1143 aaKnown RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 BBS9Q3SYG4 887 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 ENOSF1Q7L5Y1 443 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 LONP2Q86WA8 852 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 RNF168Q8IYW5 571 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 HPDLQ96IR7 371 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 C9orf72Q96LT7 481 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 ELAC2Q9BQ52 826 aaKnown RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 LBHD1Q9BQE6 289 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms