RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 TPGS2Q68CL5 300 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 RCSD1Q6JBY9 416 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 TLDC1Q6P9B6 456 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZNF600Q6ZNG1 722 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 FASTKD5Q7L8L6 764 aaKnown RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 LRP10Q7Z4F1 713 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 OSTM1Q86WC4 334 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 FIBCD1Q8N539 461 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 FAM26EQ8N5C1 309 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 SYT2Q8N9I0 419 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 SPC24Q8NBT2 197 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 ARRDC4Q8NCT1 418 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 BBOF1Q8ND07 529 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 SUPT20HQ8NEM7 779 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 IPMKQ8NFU5 416 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 OR6C4Q8NGE1 309 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 SMARCC2Q8TAQ2 1214 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 CPA5Q8WXQ8 436 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 CUL5Q93034 780 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 INTS12Q96CB8 462 aaKnown RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 TSPAN17Q96FV3 270 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 RBM41Q96IZ5 413 aaKnown RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 OSBPL9Q96SU4 736 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 CGREF1Q99674 301 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 NTPCRQ9BSD7 190 aaKnown RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 MCMBPQ9BTE3 642 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 APOL5Q9BWW9 433 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 SPZ1Q9BXG8 430 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 C1QTNF3Q9BXJ4 246 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 TEX13BQ9BXU2 312 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 WNT5BQ9H1J7 359 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 CLSTN2Q9H4D0 955 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 MROH8Q9H579 483 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 ACAD9Q9H845 621 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 BATF3Q9NR55 127 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 HELLSQ9NRZ9 838 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 NFKBIL1Q9UBC1 381 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 HESX1Q9UBX0 185 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 MTRF1LQ9UGC7 380 aaKnown RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 SH3BGRL2Q9UJC5 107 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 DBR1Q9UK59 544 aaKnown RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 PAIP2BQ9ULR5 123 aaKnown RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZNRF3Q9ULT6 936 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 HPCAL4Q9UM19 191 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 EDARQ9UNE0 448 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 SCAF8Q9UPN6 1271 aaKnown RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 CAB39Q9Y376 341 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 RRP7AQ9Y3A4 280 aaKnown RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 MYO3BQ8WXR4 1341 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZNF335Q9H4Z2 1342 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 HFM1A2PYH4 1435 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 SCAPERQ9BY12 1400 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 EHBP1L1Q8N3D4 1523 aa5.11□□□□□ -1.59
HMGB3P9-201ENST00000441799 TSPY2A6NKD2 308 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 RSPH10B2B2RC85 870 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 PI4K2BG5E9Z4 385 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 CACNB4O00305 520 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 LSM1O15116 133 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 CTIFO43310 598 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 PRPF3O43395 683 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 ROCK2O75116 1388 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 POP4O95707 220 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 TBC1D8O95759 1140 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZFYP08048 801 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 IFIT1P09914 478 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 RSPH10BP0C881 870 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 TSPY3P0CV98 308 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 TSPY8P0CW00 308 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 DLATP10515 647 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 UBL4AP11441 157 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZNF20P17024 532 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 XPAP23025 273 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 U2AF2P26368 475 aaKnown RBP eCLIP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 RPL9P32969 192 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 GCKP35557 465 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 SOX6P35712 828 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 CHKAP35790 457 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 CCT6AP40227 531 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 MCM2P49736 904 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 PMS2P54278 862 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 RACK1P63244 317 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 TSPY1Q01534 308 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 ROR2Q01974 943 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 DDR1Q08345 913 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 MAPRE2Q15555 327 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZRSR1Q15695 479 aaKnown RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 GEN1Q17RS7 908 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 MYOM3Q5VTT5 1437 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 UHRF1BP1Q6BDS2 1440 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 DRICH1Q6PGQ1 229 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 C16orf86Q6ZW13 317 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 NLRP9Q7RTR0 991 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 EPHX4Q8IUS5 362 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 NKAIN4Q8IVV8 208 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 ITPRIPQ8IWB1 547 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 SLC15A3Q8IY34 581 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 CCDC170Q8IYT3 715 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 ZNF654Q8IZM8 581 aa5.1□□□□□ -1.59
HMGB3P9-201ENST00000441799 LRRC47Q8N1G4 583 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms