RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ZFPL1O95159 310 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 ABHD16AO95870 558 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 KRT18P05783 430 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 HDCP19113 662 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 DDX6P26196 483 aaKnown RBP eCLIP4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 CXADRP78310 365 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 SCAPQ12770 1279 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 TCF15Q12870 199 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 TP53BP2Q13625 1128 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 KCNV1Q6PIU1 500 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 APOA5Q6Q788 366 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 LDLRAD3Q86YD5 345 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 CCAR1Q8IX12 1150 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 CFAP52Q8N1V2 620 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 IL31RAQ8NI17 732 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 NACC2Q96BF6 587 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 RNF31Q96EP0 1072 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 SUCLG2Q96I99 432 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 BOD1Q96IK1 185 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 VKORC1Q9BQB6 163 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 SARGQ9BW04 601 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 TRIM54Q9BYV2 358 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 C22orf23Q9BZE7 217 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 LRRC27Q9C0I9 530 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 SLITRK6Q9H5Y7 841 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 ATP6V0A4Q9HBG4 840 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 SLC52A1Q9NWF4 448 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 TPCN1Q9ULQ1 816 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 PAXBP1Q9Y5B6 917 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 COL4A3Q01955 1670 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 ISM1B1AKI9 464 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 POLRMTO00411 1230 aaKnown RBP4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 CDKL5O76039 1030 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 SPDEFO95238 335 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 MAP4K4O95819 1239 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 THP07101 528 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 KITP10721 976 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 TRIM27P14373 513 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 KCNA2P16389 499 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 EN2P19622 333 aaPredicted RBP4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 PEX2P28328 305 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 SLC7A1P30825 629 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 FHL2Q14192 279 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 CRB2Q5IJ48 1285 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 LY6G5CQ5SRR4 150 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 TAPT1Q6NXT6 567 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 ZNF783Q6ZMS7 281 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 CLNKQ7Z7G1 428 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 USP37Q86T82 979 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 CELF5Q8N6W0 485 aaKnown RBP4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 OR6B3Q8NGW1 331 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 ANKS1AQ92625 1134 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 TRIB1Q96RU8 372 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 WDR11Q9BZH6 1224 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 BHMT2Q9H2M3 363 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 SERHL2Q9H4I8 314 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 GALNT9Q9HCQ5 603 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 TMEM74BQ9NUR3 256 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 PLEKHM1Q9Y4G2 1056 aa4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
TRAPPC13-204ENST00000438419 A0A1W2PS29 197 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 GRID2IPA4D2P6 1211 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 MYADML2A6NDP7 307 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 E7ENX8 843 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 M0QYG6 137 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 MYO1FO00160 1098 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 SOAT2O75908 522 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 FOSP01100 380 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 MYL1P05976 194 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 PIM1P11309 404 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 RPL17P18621 184 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 ZEB1P37275 1124 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 ARFIP2P53365 341 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 TAP2Q03519 686 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 SEMA5AQ13591 1074 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 CYP2A13Q16696 494 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 FAM160B1Q5W0V3 765 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 PCSK4Q6UW60 755 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 PPP1R32Q7Z5V6 425 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 COLGALT2Q8IYK4 626 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 PCSK9Q8NBP7 692 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 ASB10Q8WXI3 467 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 FUBP1Q96AE4 644 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 LRIG1Q96JA1 1093 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 P2RX7Q99572 595 aaKnown RBP4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 MRIQ9BWK5 157 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 ALOXE3Q9BYJ1 711 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 DPH1Q9BZG8 443 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 AGAP1Q9UPQ3 857 aa4.56□□□□□ -1.68
TRAPPC13-204ENST00000438419 PRAMEF33A0A0G2JMD5 474 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 PIPSLA2A3N6 862 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 PRAMEF10O60809 474 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 DNAJB5O75953 348 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 UNC5CO95185 931 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 KIF20AO95235 890 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 GRPP07492 148 aa4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 EGR2P11161 476 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC13-204ENST00000438419 MYF5P13349 255 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms