RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 MCF2P10911 925 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ZKSCAN8Q15776 578 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 BMT2Q1RMZ1 405 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 SPOPLQ6IQ16 392 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 CATSPERGQ6ZRH7 1159 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 LINC00523Q86TU6 105 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 PPHLN1Q8NEY8 458 aaKnown RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 SKA2Q8WVK7 121 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 MAML1Q92585 1016 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 APBB2Q92870 758 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 CHMP6Q96FZ7 201 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 A0A087X0B3 334 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 LHX1P48742 406 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 MCL1Q07820 350 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 LLGL1Q15334 1064 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 HAS1Q92839 578 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ABHD16BQ9H3Z7 469 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 PRDM16Q9HAZ2 1276 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 CFAP73A6NFT4 308 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 HGSO14964 777 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 FBXO21O94952 628 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 DEUP1Q05D60 604 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 SH2D3AQ9BRG2 576 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 IRX2Q9BZI1 471 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ANGPTL2Q9UKU9 493 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 NEU2Q9Y3R4 380 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 STIP1P31948 543 aaKnown RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 RAB27AP51159 221 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ACAP1Q15027 740 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 PORCNQ9H237 461 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 PSMD10O75832 226 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 TTC4O95801 387 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 FDFT1P37268 417 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ILF2Q12905 390 aaKnown RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 CLEC16AQ2KHT3 1053 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 GNASQ5JWF2 1037 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 MTHFD1LQ6UB35 978 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 THAP2Q9H0W7 228 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ASCC2Q9H1I8 757 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 SHANK3Q9BYB0 1731 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 HOXA2O43364 376 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 RAD51CO43502 376 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 PTPRAP18433 802 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 PMS1P54277 932 aaKnown RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 BEND6Q5SZJ8 279 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 FRA10AC1Q70Z53 315 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 JAMLQ86YT9 394 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 PPIL6Q8IXY8 311 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 DCP1BQ8IZD4 617 aaKnown RBP12.11□□□□□ -0.47
PTCH1-208ENST00000430669 ETNPPLQ8TBG4 499 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 BLOC1S4Q9NUP1 217 aa12.11□□□□□ -0.47
PTCH1-208ENST00000430669 PLEKP08567 350 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 INHBEP58166 350 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 TMPRSS15P98073 1019 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 ENPEPQ07075 957 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 PSMD6Q15008 389 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 MEI1Q5TIA1 1274 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 PRAMEF18Q5VWM3 479 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 ATPAF2Q8N5M1 289 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 VCX3AQ9NNX9 186 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 TTC7AQ9ULT0 858 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 ATRNL1Q5VV63 1379 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 C1orf228Q6PIY5 440 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 MAP4K3Q8IVH8 894 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 KLHL29Q96CT2 875 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 SGSM3Q96HU1 749 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 SERPINB12Q96P63 405 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 CYTH2Q99418 400 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 COL1A2P08123 1366 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 GOLGA8MH3BSY2 632 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 PAX3P23760 479 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 PSMC6P62333 389 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 TRADDQ15628 312 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 NFIL3Q16649 462 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 DEFB132Q7Z7B7 95 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 ASB7Q9H672 318 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 COL2A1P02458 1487 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 COILP38432 576 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 SPDYCQ5MJ68 293 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 LRRC71Q8N4P6 559 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 GPRC5CQ9NQ84 441 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 APOBEC2Q9Y235 224 aaKnown RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 ZWINTO95229 277 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 STAG3L1P0CL83 205 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 RECQLP46063 649 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 GSPT2Q8IYD1 628 aaKnown RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 EIF1ADQ8N9N8 165 aaKnown RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 TSPAN17Q96FV3 270 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 DUSP9Q99956 384 aaKnown RBP12.1□□□□□ -0.47
PTCH1-208ENST00000430669 RRN3Q9NYV6 651 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 APRTP07741 180 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 BRAFP15056 766 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 CASP4P49662 377 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms