RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MYO1HQ8N1T3 1032 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 SLC44A3Q8N4M1 653 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 BRIX1Q8TDN6 353 aaKnown RBP5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 P2RX7Q99572 595 aaKnown RBP5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 PRRX2Q99811 253 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 RSAD1Q9HA92 442 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 DMRT1Q9Y5R6 373 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 VSTM5A8MXK1 200 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 TOR1BO14657 336 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 TYRP1P17643 537 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 TGM1P22735 817 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 ADRA1BP35368 520 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 MPLP40238 635 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 ANXA11P50995 505 aaKnown RBP5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 HNRNPMP52272 730 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 INHBCP55103 352 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 GRM3Q14832 879 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 LLGL1Q15334 1064 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 SF3B3Q15393 1217 aaKnown RBP5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 MINDY4Q4G0A6 757 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 SP5Q6BEB4 398 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 CLNKQ7Z7G1 428 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 DAAM2Q86T65 1068 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 LCORLQ8N3X6 602 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 AOPEPQ8N6M6 819 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 PSD4Q8NDX1 1056 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 FAM46DQ8NEK8 389 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 SLC30A5Q8TAD4 765 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 TTC8Q8TAM2 541 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 LPIN2Q92539 896 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 SMOQ99835 787 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 ALG13Q9NP73 1137 aaKnown RBP5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 TESQ9UGI8 421 aaKnown RBP5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 MAST3O60307 1309 aa5.68□□□□□ -1.5
HMGB1P49-201ENST00000418882 TRGV11A0A075B6L2 103 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 A0A087X1B8 175 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 DCLK1O15075 740 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 RAMP2O60895 175 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 UNC5CO95185 931 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 GCP02774 474 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 PIM1P11309 404 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 HMGA2P52926 109 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 MXRA7P84157 204 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 PIGFQ07326 219 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 FGL2Q14314 439 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 ANO6Q4KMQ2 910 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 TSHZ1Q6ZSZ6 1077 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 KIAA0319LQ8IZA0 1049 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 LNX2Q8N448 690 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 PTCD3Q96EY7 689 aaKnown RBP5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 CNPPD1Q9BV87 410 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 TMEM60Q9H2L4 133 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 CYP4F11Q9HBI6 524 aa5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P49-201ENST00000418882 TMEM191CA6NGB0 347 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 MGST3O14880 152 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 CHEK2O96017 543 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 HKR1P10072 659 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 KITP10721 976 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 PPP3CBP16298 524 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 ZNF134P52741 427 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 ARFIP2P53365 341 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 USP14P54578 494 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 TGFB2P61812 414 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 RPS7P62081 194 aaKnown RBP5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 FPGSQ05932 587 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 ARHGAP29Q52LW3 1261 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 CYB5RLQ6IPT4 315 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 WDR75Q8IWA0 830 aaKnown RBP5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 COLGALT2Q8IYK4 626 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 MTFMTQ96DP5 389 aaKnown RBP5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 COQ10AQ96MF6 247 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 PUS7Q96PZ0 661 aaKnown RBP5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 AIFM2Q9BRQ8 373 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 C22orf23Q9BZE7 217 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 TOR3AQ9H497 397 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 CASS4Q9NQ75 786 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 INTS13Q9NVM9 706 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 TBCCD1Q9NVR7 557 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 KCTD5Q9NXV2 234 aa5.66□□□□□ -1.5
HMGB1P49-201ENST00000418882 VWC2LB2RUY7 222 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 NPTX2P47972 431 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 VWA1Q6PCB0 445 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 APOA5Q6Q788 366 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 Q6ZNX1 250 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 FAM9AQ8IZU1 332 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 IL31RAQ8NI17 732 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 MYCBPAPQ8TBZ2 947 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 SNX19Q92543 992 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 MAML1Q92585 1016 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 TRIM54Q9BYV2 358 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 PRDM13Q9H4Q3 707 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 SYNPO2LQ9H987 977 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 METTL14Q9HCE5 456 aaKnown RBP5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 SARS2Q9NP81 518 aaKnown RBP5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 C1orf112Q9NSG2 853 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 OBP2AQ9NY56 170 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 HESX1Q9UBX0 185 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms