RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 GRIK4Q16099 956 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 IQSEC1Q6DN90 963 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 ZPBP2Q6X784 338 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 A1CFQ9NQ94 594 aaKnown RBP20.62■□□□□ 0.89
PCDH8-202ENST00000377942 MYOM1P52179 1685 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 SPECC1L-ADORA2AF8WAN1 911 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 CYTH3O43739 400 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 HMBSP08397 361 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 HP1BP3Q5SSJ5 553 aaPredicted RBP20.62■□□□□ 0.89
PCDH8-202ENST00000377942 CATSPERGQ6ZRH7 1159 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 KIRREL3Q8IZU9 778 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 ATP6V0D2Q8N8Y2 350 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 FGD4Q96M96 766 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 PNMA5Q96PV4 448 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 VIPAS39Q9H9C1 493 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 ORC6Q9Y5N6 252 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 SLIT3O75094 1523 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 FRMPD4Q14CM0 1322 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 SMIM24O75264 130 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 CDH16O75309 829 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 EPC2Q52LR7 807 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 SEZ6Q53EL9 994 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 GLRA4Q5JXX5 417 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 GRAMD1AQ96CP6 724 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 AKAP3O75969 853 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 TMCC1O94876 653 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 LSM8O95777 96 aaKnown RBP20.62■□□□□ 0.89
PCDH8-202ENST00000377942 AGTP01019 485 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 LHX1P48742 406 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 VSNL1P62760 191 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 LRIG3Q6UXM1 1119 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 USP38Q8NB14 1042 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 TPCN2Q8NHX9 752 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 CDC26Q8NHZ8 85 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 TRIM10Q9UDY6 481 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 ELAVL2Q12926 359 aaKnown RBP20.61■□□□□ 0.89
PCDH8-202ENST00000377942 LY6KQ17RY6 165 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 FAM47EQ6ZV65 393 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 JAMLQ86YT9 394 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 GBP5Q96PP8 586 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 EGFL8Q99944 293 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 NSMCE4AQ9NXX6 385 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 GMNCA6NCL1 334 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 AP1G2O75843 785 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 CYP11B1P15538 503 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 AXLP30530 894 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 IL31Q6EBC2 164 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 CHSY1Q86X52 802 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 PABPC5Q96DU9 382 aaKnown RBP20.61■□□□□ 0.89
PCDH8-202ENST00000377942 TRIM15Q9C019 465 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 ZC3H7BQ9UGR2 993 aaKnown RBP20.61■□□□□ 0.89
PCDH8-202ENST00000377942 SMG5Q9UPR3 1016 aaKnown RBP20.61■□□□□ 0.89
PCDH8-202ENST00000377942 RRP15Q9Y3B9 282 aaKnown RBP20.61■□□□□ 0.89
PCDH8-202ENST00000377942 NEU2Q9Y3R4 380 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 CYB561D2O14569 222 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 BCAT1P54687 386 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 PSMC6P62333 389 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 VGLL4Q14135 290 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 MYPNQ86TC9 1320 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 EGFRP00533 1210 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 ZNF410Q86VK4 478 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 CYP2W1Q8TAV3 490 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 TSPAN17Q96FV3 270 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 DCUN1D1Q96GG9 259 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 MRPL40Q9NQ50 206 aaKnown RBP20.61■□□□□ 0.89
PCDH8-202ENST00000377942 NDFIP2Q9NV92 336 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 ITGA11Q9UKX5 1188 aa20.61■□□□□ 0.89
PCDH8-202ENST00000377942 MRC1P22897 1456 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 A0A087X0T9 212 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 FBXO21O94952 628 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 LUC7L3O95232 432 aaKnown RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 FAM228BP0C875 321 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 ARHGAP15Q53QZ3 475 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 HACD3Q9P035 362 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 STIP1P31948 543 aaKnown RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 C10orf120Q5SQS8 335 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 ASB7Q9H672 318 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 ABI2Q9NYB9 513 aaPredicted RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 TMEM247A6NEH6 219 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 CFLARO15519 480 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 ATMINO43313 823 aaPredicted RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 SH3BGRP55822 239 aaPredicted RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 RPL10AP62906 217 aaKnown RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 IMPG1Q17R60 797 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 EARS2Q5JPH6 523 aaKnown RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 MMGT1Q8N4V1 131 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 AGAP3Q96P47 875 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 FHDC1Q9C0D6 1143 aaPredicted RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 THAP2Q9H0W7 228 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 ZNF212Q9UDV6 495 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 MED1Q15648 1581 aaPredicted RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 PIK3CDO00329 1044 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 SGPL1O95470 568 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 FNTAP49354 379 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 NT5DC1Q5TFE4 455 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 CALML6Q8TD86 181 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 TRIM51Q9BSJ1 452 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 KANSL3Q9P2N6 904 aa20.6■□□□□ 0.89
PCDH8-202ENST00000377942 XPO7Q9UIA9 1087 aaKnown RBP20.6■□□□□ 0.89
PCDH8-202ENST00000377942 ZNF197O14709 1029 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms