RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 TTC36A6NLP5 189 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 F8W8V4 182 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 ATP6V1G1O75348 118 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 CYP11B1P15538 503 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 ATF3P18847 181 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 GCLMP48507 274 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 AQP4P55087 323 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 CAV1Q03135 178 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 LPCAT4Q643R3 524 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 CDHR3Q6ZTQ4 885 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 ZNF653Q96CK0 615 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 FNBP1Q96RU3 617 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 STRCQ7RTU9 1775 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 IGLV3-22A0A075B6J6 115 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 SLC26A4O43511 780 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 MAGEC1O60732 1142 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 STK10O94804 968 aaKnown RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 TFAP2AP05549 437 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 UNGP13051 313 aaPredicted RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 PLS3P13797 630 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 YY1P25490 414 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 MCCD1P59942 119 aaPredicted RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 ARHGAP4P98171 946 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 RASA3Q14644 834 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 ACAD11Q709F0 780 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 ULK2Q8IYT8 1036 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 HELQQ8TDG4 1101 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 SHC3Q92529 594 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 SERAC1Q96JX3 654 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 PRICKLE1Q96MT3 831 aaPredicted RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 TTC25Q96NG3 672 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 SPDYE16A6NNV3 312 aaPredicted RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 A8MXQ7 604 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 FCHO1O14526 889 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 HNRNPCL1O60812 293 aaKnown RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 SNAP25P60880 206 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 RPS8P62241 208 aaKnown RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 GK3PQ14409 553 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 ATP13A4Q4VNC1 1196 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 RNASEH2BQ5TBB1 312 aaKnown RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 ISLR2Q6UXK2 745 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 NMD3Q96D46 503 aaKnown RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 OXNAD1Q96HP4 312 aaPredicted RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 IWS1Q96ST2 819 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 SETDB2Q96T68 719 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 CBWD1Q9BRT8 395 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 TMEM117Q9H0C3 514 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 SSU72Q9NP77 194 aaKnown RBP12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 UBAP1Q9NZ09 502 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 DNPEPQ9ULA0 475 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 FAM200BP0CF97 657 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 CDK4P11802 303 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 FUT4P22083 530 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 TPP2P29144 1249 aaPredicted RBP12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 HPCAP84074 193 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 CLEC16AQ2KHT3 1053 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 FNBP1LQ5T0N5 605 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 SLC9A9Q8IVB4 645 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 PPM1KQ8N3J5 372 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 SMC6Q96SB8 1091 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 DDX4Q9NQI0 724 aaKnown RBP12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 ATP9BO43861 1147 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 ZWINTO95229 277 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 C1QAP02745 245 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 VARSP26640 1264 aaKnown RBP12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 SSTR1P30872 391 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 CETN2P41208 172 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 PDIA2Q13087 525 aaKnown RBP12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 MTM1Q13496 603 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 TFDP1Q14186 410 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 RASA2Q15283 850 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 QRICH1Q2TAL8 776 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 SLC10A5Q5PT55 438 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 WDR18Q9BV38 432 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 CCDC106Q9BWC9 280 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 PCIF1Q9H4Z3 704 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 MANSC1Q9H8J5 431 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 C17orf75Q9HAS0 396 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 RHBDL2Q9NX52 303 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 GMEB1Q9Y692 573 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 H3BRJ5 948 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 DNALI1O14645 258 aaPredicted RBP12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 ALOX15BO15296 676 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 TM7SF2O76062 418 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 PGM1P36871 562 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 NCOA4Q13772 614 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 NFIXQ14938 502 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 CCNG2Q16589 344 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 ANKRD22Q5VYY1 191 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 MYCT1Q8N699 235 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 GSTCDQ8NEC7 633 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 FAM172AQ8WUF8 416 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 SLC35B4Q969S0 331 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 LENG1Q96BZ8 264 aaPredicted RBP12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 MPP4Q96JB8 637 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 FAM161BQ96MY7 647 aa12.3□□□□□ -0.44
SMARCA1-201ENST00000371121 OSBPL8Q9BZF1 889 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms