RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TRPC1P48995 793 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 ITGB3BPQ13352 177 aaPredicted RBP16.65■□□□□ 0.26
COL17A1-202ENST00000369733 TRADDQ15628 312 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 BRINP3Q76B58 766 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 IFT43Q96FT9 208 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 TSPOAP1O95153 1857 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 LCP1P13796 627 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 HADHAP40939 763 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 TMEM237Q96Q45 408 aa16.65■□□□□ 0.26
COL17A1-202ENST00000369733 FAM49AQ9H0Q0 323 aaPredicted RBP16.65■□□□□ 0.26
COL17A1-202ENST00000369733 TOPORSQ9NS56 1045 aaPredicted RBP16.65■□□□□ 0.26
COL17A1-202ENST00000369733 NUDT2P50583 147 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 GIT2Q14161 759 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 USP10Q14694 798 aaKnown RBP16.64■□□□□ 0.25
COL17A1-202ENST00000369733 RASA2Q15283 850 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 PGM2Q96G03 612 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 DDX28Q9NUL7 540 aaKnown RBP16.64■□□□□ 0.25
COL17A1-202ENST00000369733 ADGRB1O14514 1584 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 A8MXQ7 604 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 IMPG1Q17R60 797 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 SH3RF1Q7Z6J0 888 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 OR6P1Q8NGX9 317 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 DDI1Q8WTU0 396 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 AKAP3O75969 853 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 GTF2H1P32780 548 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 SPRP35270 261 aaPredicted RBP16.64■□□□□ 0.25
COL17A1-202ENST00000369733 SGSM1Q2NKQ1 1148 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 PRCCQ92733 491 aaPredicted RBP16.64■□□□□ 0.25
COL17A1-202ENST00000369733 MASTLQ96GX5 879 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 PAFAH2Q99487 392 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 NYAP2Q9P242 653 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 TAGLN3Q9UI15 199 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 C16orf96A6NNT2 1141 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 ECE2O60344 883 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 DAB1O75553 588 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 PLOD1Q02809 727 aaPredicted RBP16.64■□□□□ 0.25
COL17A1-202ENST00000369733 SPOUT1Q5T280 376 aaKnown RBP16.64■□□□□ 0.25
COL17A1-202ENST00000369733 GPAT2Q6NUI2 795 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 ADCK1Q86TW2 530 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 SLC20A1Q8WUM9 679 aa16.64■□□□□ 0.25
COL17A1-202ENST00000369733 APOA1P02647 267 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 EFNA5P52803 228 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 CCNA1P78396 465 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 PLA2G4FQ68DD2 849 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 C11orf63Q6NUN7 778 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 NUP93Q8N1F7 819 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 TATDN2Q93075 761 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 NMD3Q96D46 503 aaKnown RBP16.63■□□□□ 0.25
COL17A1-202ENST00000369733 TYW5A2RUC4 315 aaKnown RBP16.63■□□□□ 0.25
COL17A1-202ENST00000369733 GZMAP12544 262 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 KLHL4Q9C0H6 718 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 JPH1Q9HDC5 661 aaPredicted RBP16.63■□□□□ 0.25
COL17A1-202ENST00000369733 OLFML3Q9NRN5 406 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 ABCF3Q9NUQ8 709 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 HACD3Q9P035 362 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 H0Y626 953 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 TRIM16O95361 564 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 PPARGP37231 505 aaPredicted RBP16.63■□□□□ 0.25
COL17A1-202ENST00000369733 RGS7P49802 495 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 SNX30Q5VWJ9 437 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 ZNF555Q8NEP9 628 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 MIEF2Q96C03 454 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 DACH2Q96NX9 599 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 MSH4O15457 936 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 HSPA1AP0DMV8 641 aaKnown RBP16.63■□□□□ 0.25
COL17A1-202ENST00000369733 HSPA1BP0DMV9 641 aaKnown RBP16.63■□□□□ 0.25
COL17A1-202ENST00000369733 CYP11B1P15538 503 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 RBBP7Q16576 425 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 SLC24A2Q9UI40 661 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
COL17A1-202ENST00000369733 GGA2Q9UJY4 613 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 SUGT1Q9Y2Z0 365 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 ARHGEF9O43307 516 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 PDE5AO76074 875 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 AQP5P55064 265 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 SLC34A1Q06495 639 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 CYP4A22Q5TCH4 519 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 MYLK2Q9H1R3 596 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 LRCH1Q9Y2L9 728 aa16.63■□□□□ 0.25
COL17A1-202ENST00000369733 ZNF189O75820 626 aaPredicted RBP16.62■□□□□ 0.25
COL17A1-202ENST00000369733 LRRC6Q86X45 466 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 TSC22D4Q9Y3Q8 395 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 SRRM3A6NNA2 597 aaPredicted RBP16.62■□□□□ 0.25
COL17A1-202ENST00000369733 TULP2O00295 520 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 PRKCBP05771 671 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 EPHB2P29323 1055 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 C2CD6Q53TS8 623 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 PCYOX1LQ8NBM8 494 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 STK32AQ8WU08 396 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 FRMD8Q9BZ67 464 aaPredicted RBP16.62■□□□□ 0.25
COL17A1-202ENST00000369733 PRR12Q9ULL5 1215 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 BGNP21810 368 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 KCNA1Q09470 495 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 SPDYCQ5MJ68 293 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 CLEC4FQ8N1N0 589 aa16.62■□□□□ 0.25
COL17A1-202ENST00000369733 EIF1ADQ8N9N8 165 aaKnown RBP16.62■□□□□ 0.25
COL17A1-202ENST00000369733 PPHLN1Q8NEY8 458 aaKnown RBP16.62■□□□□ 0.25
COL17A1-202ENST00000369733 ARHGEF1Q92888 912 aaKnown RBP16.62■□□□□ 0.25
COL17A1-202ENST00000369733 DCPSQ96C86 337 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms