RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Gm45233A0A0N4SVE0 221 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Btbd3P58545 530 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Rbm20Q3UQS8 1199 aaKnown RBP7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Armcx5Q3UZB0 606 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Gm5431Q5NCB3 844 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 9930111J21Rik1Q5SVP0 844 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Mea1Q64327 174 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Atp11bQ6DFW5 1175 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Edrf1Q6GQV7 1239 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Supt20hQ7TT00 530 aaKnown RBP7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Ints2Q80UK8 1198 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Dyrk4Q8BI55 632 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Atg16l1Q8C0J2 607 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Lrrd1Q8C0R9 853 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 A430089I19RikQ8C9W1 407 aa7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Pnpt1Q8K1R3 783 aaKnown RBP7.52□□□□□ -1.21
Chm-202ENSMUST00000113388 Gm12248A0A1W2P8B8 313 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Supt3B0QZW4 406 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 SlxD3Z347 212 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Gm4841E9QAA8 417 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Magea4F2Z493 315 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Bcl7cO08664 217 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Rhox6O70238 227 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Slc27a3O88561 667 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Kcnj5P48545 419 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Rbp3P49194 1234 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Nudt1P53368 156 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Klrg2Q3UM83 387 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Sult1d1Q3UZZ6 295 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Krt31Q61765 416 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Tll1Q62381 1013 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 CbarpQ66L44 698 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Tmem130Q6NXM3 419 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Nup85Q8R480 656 aaKnown RBP7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 ClyblQ8R4N0 338 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Mta3Q924K8 591 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Rsl24d1Q99L28 163 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Mei1Q9D4I2 1268 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Gm29106A0A087WSP8 697 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Unc5cO08747 931 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Man1a2P39098 641 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Hps5P59438 1126 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Teddm2Q208S0 260 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Gm10488Q4KL05 212 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Pex1Q5BL07 1284 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Itih1Q61702 907 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 RetsatQ64FW2 609 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Crtc1Q68ED7 630 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 GnasQ6R0H7 1133 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Krt9Q6RHW0 743 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Rasgrp4Q8BTM9 673 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Fsd1lQ8BYN5 507 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Nlrp4bQ8C6J9 863 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Ugt3a2Q8JZZ0 523 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Pard3bQ9CSB4 1203 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Usp12Q9D9M2 370 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Apbb2Q9DBR4 760 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Zbtb32Q9JKD9 465 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Ak2Q9WTP6 239 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 MipepA6H611 711 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Gm20721E9Q2U8 318 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Gm20509G3UZF1 325 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Gsta3P30115 221 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Fitm2P59266 262 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Rps12P63323 132 aaKnown RBP7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Serpinb5P70124 375 aaKnown RBP7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Fcho2Q3UQN2 809 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Vps51Q3UVL4 782 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Znf827Q505G8 1078 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Phf12Q5SPL2 1003 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Tmcc2Q80W04 706 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Ppm1lQ8BHN0 360 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Ephb1Q8CBF3 984 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Mettl13Q91YR5 698 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Tor1aip1Q921T2 595 aaKnown RBP7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Chid1Q922Q9 393 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Q9CPZ3 230 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Lyrm1Q9CQB7 122 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Tpd52l2Q9CYZ2 220 aaKnown RBP7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Snf8Q9CZ28 258 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Hormad1Q9D5T7 392 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Polr2dQ9D7M8 142 aaKnown RBP7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Scyl3Q9DBQ7 735 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Poc5Q9DBS8 558 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Ube3bQ9ES34 1070 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Pex11aQ9Z211 246 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 Myh4Q5SX39 1939 aa7.51□□□□□ -1.21
Chm-202ENSMUST00000113388 TprnA2AI08 749 aaKnown RBP7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Sema3aO08665 772 aa7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Adcy1O88444 1118 aa7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Igf2bp1O88477 577 aaKnown RBP7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Siah1aP61092 282 aa7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 RelaQ04207 549 aa7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Syne3Q4FZC9 975 aa7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Clhc1Q5M6W3 596 aa7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Wbp4Q61048 376 aa7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Zc3h11aQ6NZF1 792 aaKnown RBP7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Rps6kb1Q8BSK8 525 aa7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 Ccdc134Q8C7V8 229 aa7.5□□□□□ -1.21
Chm-202ENSMUST00000113388 DpydQ8CHR6 1025 aa7.5□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms