RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 RIPK2O43353 540 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 ICAM1P05362 532 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 PPM1FP49593 454 aaPredicted RBP17.48■□□□□ 0.39
SCARB2-210ENST00000638567 STX3Q13277 289 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 SLC12A1Q13621 1099 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 ARHGEF19Q8IW93 802 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 BEST2Q8NFU1 509 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 SDCCAG3Q96C92 435 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 KDM4CQ9H3R0 1056 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 GTSE1Q9NYZ3 720 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 HAO1Q9UJM8 370 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 ZNRF3Q9ULT6 936 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 SUFUQ9UMX1 484 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 ENO4A6NNW6 628 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 RARAP10276 462 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 MUTP22033 750 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 NME3Q13232 169 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 HIC1Q14526 733 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 METTL23Q86XA0 190 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 KRT35Q92764 455 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 THTPAQ9BU02 230 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 ANLNQ9NQW6 1124 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 CTCFP49711 727 aaPredicted RBP17.48■□□□□ 0.39
SCARB2-210ENST00000638567 GEMIN4P57678 1058 aaKnown RBP17.48■□□□□ 0.39
SCARB2-210ENST00000638567 OTOP1Q7RTM1 612 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 ATP6V1E2Q96A05 226 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 UPF3AQ9H1J1 476 aaKnown RBP17.48■□□□□ 0.39
SCARB2-210ENST00000638567 MANSC1Q9H8J5 431 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 DCCP43146 1447 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 NFIBO00712 420 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 KIF1CO43896 1103 aaKnown RBP17.48■□□□□ 0.39
SCARB2-210ENST00000638567 KCNT1Q5JUK3 1230 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 PPIL6Q8IXY8 311 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 LRRC43Q8N309 656 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 NKX2-3Q8TAU0 364 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 DNAJC9Q8WXX5 260 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 SEPT1Q8WYJ6 367 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 TATDN2Q93075 761 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 C17orf75Q9HAS0 396 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 SNX9Q9Y5X1 595 aa17.48■□□□□ 0.39
SCARB2-210ENST00000638567 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-210ENST00000638567 C3P01024 1663 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 SPDYE16A6NNV3 312 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-210ENST00000638567 ZNF263O14978 683 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 PFDN6O15212 129 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 NVLO15381 856 aaKnown RBP17.47■□□□□ 0.39
SCARB2-210ENST00000638567 PSTPIP1O43586 416 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 TRAPPC3O43617 180 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 ATP9BO43861 1147 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 PRKCIP41743 596 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 CUL3Q13618 768 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 SPDYE2Q495Y8 402 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 LRRC71Q8N4P6 559 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 FAM163AQ96GL9 167 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-210ENST00000638567 AGAP3Q96P47 875 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 MED15Q96RN5 788 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 GCOM2Q9BZD3 368 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-210ENST00000638567 SUDS3Q9H7L9 328 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-210ENST00000638567 RICTORQ6R327 1708 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 ANP32DO95626 131 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 RXRBP28702 533 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 POU5F1BQ06416 359 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 TRADDQ15628 312 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 INPP4AQ96PE3 977 aaPredicted RBP17.47■□□□□ 0.39
SCARB2-210ENST00000638567 MAFGO15525 162 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 PROSCO94903 275 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 SNRPAP09012 282 aaKnown RBP17.47■□□□□ 0.39
SCARB2-210ENST00000638567 LCP1P13796 627 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 TTLL4Q14679 1199 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 KLC3Q6P597 504 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 RASSF3Q86WH2 238 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 TTC39CQ8N584 583 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 PGBD4Q96DM1 585 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 MTBPQ96DY7 904 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 AP5M1Q9H0R1 490 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 GANQ9H2C0 597 aa17.47■□□□□ 0.39
SCARB2-210ENST00000638567 RARRES1P49788 294 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 RHBDL3P58872 404 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 MYBPC2Q14324 1141 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 FAXCQ5TGI0 409 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 PRAMEF18Q5VWM3 479 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 AADACL2Q6P093 401 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 NLRP9Q7RTR0 991 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 ARID3BQ8IVW6 561 aaPredicted RBP17.46■□□□□ 0.39
SCARB2-210ENST00000638567 KIRREL3Q8IZU9 778 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 NDUFAF2Q8N183 169 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 GMCL1P1Q8NEA9 526 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 RNF139Q8WU17 664 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 FAM111AQ96PZ2 611 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 RSAD1Q9HA92 442 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 CNOT7Q9UIV1 285 aaKnown RBP17.46■□□□□ 0.39
SCARB2-210ENST00000638567 NAALADL1Q9UQQ1 740 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 TMX2Q9Y320 296 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 ZFXP17010 805 aaPredicted RBP17.46■□□□□ 0.39
SCARB2-210ENST00000638567 MAGEB18Q96M61 343 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 FAM193BQ96PV7 902 aaPredicted RBP17.46■□□□□ 0.39
SCARB2-210ENST00000638567 TAS2R14Q9NYV8 317 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 TRIM33Q9UPN9 1127 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 TRIM49D1C9J1S8 452 aa17.46■□□□□ 0.39
SCARB2-210ENST00000638567 H3BRJ5 948 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms