RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 OR6C75A6NL08 312 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 TISP43B9A030 160 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 SPTLC1O15269 473 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 XPOTO43592 962 aaKnown RBP12.11□□□□□ -0.47
TARDBP-221ENST00000619555 NFICP08651 508 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 GDI1P31150 447 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 LONP1P36776 959 aaKnown RBP12.11□□□□□ -0.47
TARDBP-221ENST00000619555 ID4P47928 161 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 LILRA4P59901 499 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 GTF2BQ00403 316 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 GPR17Q13304 367 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 ZC2HC1CQ53FD0 456 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-221ENST00000619555 CENPPQ6IPU0 288 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 ZC3H14Q6PJT7 736 aaKnown RBP12.11□□□□□ -0.47
TARDBP-221ENST00000619555 TSSK4Q6SA08 328 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 USP49Q70CQ1 688 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 GPIHBP1Q8IV16 184 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 DCLK2Q8N568 766 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 ATAD1Q8NBU5 361 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 LEMD2Q8NC56 503 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 ZSCAN18Q8TBC5 510 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-221ENST00000619555 DNASE1L2Q92874 299 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 SENP8Q96LD8 212 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 TMEM209Q96SK2 561 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 LRRC3Q9BY71 257 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 DNAJC25Q9H1X3 360 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 IKZF4Q9H2S9 585 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 ZNF334Q9HCZ1 680 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-221ENST00000619555 FBXO4Q9UKT5 387 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.11□□□□□ -0.47
TARDBP-221ENST00000619555 DMXL1Q9Y485 3027 aa12.11□□□□□ -0.47
TARDBP-221ENST00000619555 TICRRQ7Z2Z1 1910 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 PIRO00625 290 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 NCAM2O15394 837 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 TBCAO75347 108 aaKnown RBP12.1□□□□□ -0.47
TARDBP-221ENST00000619555 SOAT2O75908 522 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 BMP15O95972 392 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 PSMC3P17980 439 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 TYMPP19971 482 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 SCP2P22307 547 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 DDIT3P35638 169 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 MAGEA9P43362 315 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 ACOT2P49753 483 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 CDR1P51861 262 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 EPHB3P54753 998 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 PTPAQ15257 358 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 ZNF528Q3MIS6 628 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 C9orf57Q5W0N0 161 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 OVOS1Q6IE37 1185 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 TMC8Q8IU68 726 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 MAP4K3Q8IVH8 894 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 KIAA2013Q8IYS2 634 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 TTC9BQ8N6N2 239 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 SUMF1Q8NBK3 374 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 LARP4BQ92615 738 aaKnown RBP12.1□□□□□ -0.47
TARDBP-221ENST00000619555 IRF7Q92985 503 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 RSPRY1Q96DX4 576 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 EPSTI1Q96J88 318 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 USP28Q96RU2 1077 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 TSPAN18Q96SJ8 248 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 OXCT2Q9BYC2 517 aaPredicted RBP12.1□□□□□ -0.47
TARDBP-221ENST00000619555 NDRG2Q9UN36 371 aaKnown RBP12.1□□□□□ -0.47
TARDBP-221ENST00000619555 MRPS17Q9Y2R5 130 aaKnown RBP12.1□□□□□ -0.47
TARDBP-221ENST00000619555 ZDHHC9Q9Y397 364 aa12.1□□□□□ -0.47
TARDBP-221ENST00000619555 NCOR2Q9Y618 2525 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 DNAH14Q0VDD8 3507 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 A0A1W2PRU2 124 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 MTMR11A4FU01 709 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 HEPACAM2A8MVW5 462 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 MAN2B1O00754 1011 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 KINO60870 393 aaKnown RBP12.09□□□□□ -0.47
TARDBP-221ENST00000619555 F13A1P00488 732 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 ZSCAN22P10073 491 aaPredicted RBP12.09□□□□□ -0.47
TARDBP-221ENST00000619555 RPS9P46781 194 aaKnown RBP12.09□□□□□ -0.47
TARDBP-221ENST00000619555 ALDH1A3P47895 512 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 MTAPQ13126 283 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 PLD1Q13393 1074 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 MYBPC2Q14324 1141 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 TMEM132DQ14C87 1099 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 STXBP5Q5T5C0 1151 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 ADALQ6DHV7 355 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 DYMQ7RTS9 669 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 DNAJB7Q7Z6W7 309 aaPredicted RBP12.09□□□□□ -0.47
TARDBP-221ENST00000619555 MFSD6LQ8IWD5 586 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 CD302Q8IX05 232 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 OR10T2Q8NGX3 314 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 DEPDC1BQ8WUY9 529 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 RUBCNQ92622 972 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 CCSER1Q9C0I3 900 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 SLITRK6Q9H5Y7 841 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 TRPV4Q9HBA0 871 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 SDK1Q7Z5N4 2213 aa12.09□□□□□ -0.47
TARDBP-221ENST00000619555 ANO9A1A5B4 782 aa12.08□□□□□ -0.48
TARDBP-221ENST00000619555 ZNF263O14978 683 aa12.08□□□□□ -0.48
TARDBP-221ENST00000619555 ODC1P11926 461 aa12.08□□□□□ -0.48
TARDBP-221ENST00000619555 CEBPZQ03701 1054 aaKnown RBP12.08□□□□□ -0.48
TARDBP-221ENST00000619555 ARMCX5Q6P1M9 558 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms