RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 RAD54LQ92698 747 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 NIFKQ9BYG3 293 aaKnown RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TRIM8Q9BZR9 551 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 GOLPH3LQ9H4A5 285 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 ERVK-5Q9HDB9 667 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TUFT1Q9NNX1 390 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 PANK4Q9NVE7 773 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 MIOSQ9NXC5 875 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 CFAP45Q9UL16 551 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 ZFHX2Q9C0A1 2572 aaPredicted RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 DOCK6Q96HP0 2047 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 F5P12259 2224 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TTC3P53804 2025 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 LINC01565O15544 149 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 B3GAT3O94766 335 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 ITGB1P05556 798 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TFE3P19532 575 aaPredicted RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TARSP26639 723 aaKnown RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 GRIA4P48058 902 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 NDUFV1P49821 464 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 EMP3P54852 163 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TFAMQ00059 246 aaKnown RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 MBTD1Q05BQ5 628 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 SPRED3Q2MJR0 410 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 NOTUMQ6P988 496 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 RBM43Q6ZSC3 357 aaKnown RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 ADGRD2Q7Z7M1 963 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 ECHDC2Q86YB7 292 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TMEM169Q96HH4 297 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 RHOVQ96L33 236 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TMEM74Q96NL1 305 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TGS1Q96RS0 853 aaKnown RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 SLC9A7Q96T83 725 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 TCF25Q9BQ70 676 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 JPH2Q9BR39 696 aaPredicted RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 FAM213AQ9BRX8 229 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 SRRTQ9BXP5 876 aaKnown RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 RSAD1Q9HA92 442 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 PARVGQ9HBI0 331 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 INTUQ9ULD6 942 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 BARX2Q9UMQ3 279 aaPredicted RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 NUB1Q9Y5A7 615 aa5.38□□□□□ -1.55
SYCP1-209ENST00000613524 SRPRBQ9Y5M8 271 aaKnown RBP5.38□□□□□ -1.55
SYCP1-209ENST00000613524 HIDE1A8MVS5 230 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CLDN3O15551 220 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 DDHD2O94830 711 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 STAG3L1P0CL83 205 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 GARTP22102 1010 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 HOXA11P31270 313 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 GNALP38405 381 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CASP4P49662 377 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PTENP60484 403 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 IFRD2Q12894 506 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 MXD4Q14582 209 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 RAB30Q15771 203 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CEP135Q66GS9 1140 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PRSS55Q6UWB4 352 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 AGMOQ6ZNB7 445 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CCDC73Q6ZRK6 1079 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 MICAL3Q7RTP6 2002 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 LAPTM4BQ86VI4 370 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 SPC24Q8NBT2 197 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PHC3Q8NDX5 983 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ANKRD7Q92527 254 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PGLYRP2Q96PD5 576 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 POLR3CQ9BUI4 534 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 MSTO1Q9BUK6 570 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 NT5C3AQ9H0P0 336 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ANKEF1Q9NU02 776 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 DACT1Q9NYF0 836 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 LARSQ9P2J5 1176 aaKnown RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 KDM3AQ9Y4C1 1321 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 WDR81Q562E7 1941 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ARL5CA6NH57 179 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ANKRD63C9JTQ0 380 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ENC1O14682 589 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CTIFO43310 598 aaKnown RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CCDC192P0DO97 292 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 DNAJB1P25685 340 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 LONP1P36776 959 aaKnown RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 BRCC3P46736 316 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 SLC12A3P55017 1021 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ERVFC1P60507 584 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 TYRO3Q06418 890 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 DLX2Q07687 328 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CAMK2GQ13555 558 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 LRIT3Q3SXY7 679 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 TCEAL5Q5H9L2 206 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 SCARA3Q6AZY7 606 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 KCNT2Q6UVM3 1135 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 TMC5Q6UXY8 1006 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 LRRC55Q6ZSA7 311 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 C1orf186Q6ZWK4 172 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 TAS1R1Q7RTX1 841 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 LUZP1Q86V48 1076 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 VPS52Q8N1B4 723 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 NME8Q8N427 588 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 IQUBQ8NA54 791 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 RDM1Q8NG50 284 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms