RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 LEO1Q8WVC0 666 aaPredicted RBP23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 BORCS6Q96GS4 357 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 PYM1Q9BRP8 204 aaKnown RBP23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 CRISPLD1Q9H336 500 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 AVENQ9NQS1 362 aaPredicted RBP23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 CEP72Q9P209 647 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 DOCK8Q8NF50 2099 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 DOCK6Q96HP0 2047 aa23.18■■□□□ 1.3
PPP4R1-228ENST00000584074 EIF3DO15371 548 aaKnown RBP eCLIP23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 CYP11A1P05108 521 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 CEBPBP17676 345 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 EHHADHQ08426 723 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 DUSP4Q13115 394 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 CUL4BQ13620 913 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 MYBPC2Q14324 1141 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 SCARA3Q6AZY7 606 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 POTEHQ6S545 545 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 GPD1LQ8N335 351 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 TMEM105Q8N8V8 129 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 FLCNQ8NFG4 579 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 OR10T2Q8NGX3 314 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 ZNF507Q8TCN5 953 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 TCEAL4Q96EI5 215 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 MCRS1Q96EZ8 462 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 PDE11AQ9HCR9 933 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 SERTAD1Q9UHV2 236 aa23.17■■□□□ 1.3
PPP4R1-228ENST00000584074 ZDBF2Q9HCK1 2354 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 ITGB3P05106 788 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 NPR3P17342 541 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 NHLH1Q02575 133 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 PRSS36Q5K4E3 855 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 ASTLQ6HA08 431 aaPredicted RBP23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 HS6ST3Q8IZP7 471 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 ELMOD1Q8N336 334 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 C1orf127Q8N9H9 656 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 ZNF512Q96ME7 567 aaPredicted RBP23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 WNT16Q9UBV4 365 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 DSEQ9UL01 958 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 AGAP1Q9UPQ3 857 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 SLC27A5Q9Y2P5 690 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 YIPF1Q9Y548 306 aa23.16■■□□□ 1.3
PPP4R1-228ENST00000584074 KMT2EQ8IZD2 1858 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 NOTCH4Q99466 2003 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 KPNA7A9QM74 516 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 NRG2O14511 850 aaPredicted RBP23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 KIAA0391O15091 583 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 SLFN14P0C7P3 912 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 POLR2BP30876 1174 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 CCR2P41597 374 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 CDR1P51861 262 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 SV2CQ496J9 727 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 WSCD1Q658N2 575 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 CWF19L1Q69YN2 538 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 IQCEQ6IPM2 695 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 CENPPQ6IPU0 288 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 MTSS1LQ765P7 747 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 METTL23Q86XA0 190 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 CBWD2Q8IUF1 395 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 NELFCDQ8IXH7 590 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 CEP57L1Q8IYX8 460 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 ATAD1Q8NBU5 361 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 GPR152Q8TDT2 470 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 CACTINQ8WUQ7 758 aaKnown RBP23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 SCFD1Q8WVM8 642 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 SPATA32Q96LK8 384 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 KXD1Q9BQD3 176 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 RTP3Q9BQQ7 232 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 GDE1Q9NZC3 331 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 HSPBP1Q9NZL4 362 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 CA14Q9ULX7 337 aa23.15■■□□□ 1.3
PPP4R1-228ENST00000584074 A0A1B0GVL5 298 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 MTMR11A4FU01 709 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 KRBA1A5PL33 1030 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 TGFB1I1O43294 461 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 ACTN4O43707 911 aaKnown RBP23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 PFKFB1P16118 471 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 CMA1P23946 247 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 CLCN5P51795 746 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 KRT85P78386 507 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 CYP4A22Q5TCH4 519 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 PDZD4Q76G19 769 aaPredicted RBP23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 CSGALNACT2Q8N6G5 542 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 TTC9BQ8N6N2 239 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 CXorf38Q8TB03 319 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 ZNF560Q96MR9 790 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 PRRX2Q99811 253 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 SLC39A2Q9NP94 309 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 AGPAT3Q9NRZ7 376 aa23.14■■□□□ 1.29
PPP4R1-228ENST00000584074 PTPRJQ12913 1337 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 PVALEFA0A1B0GWK0 134 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 ZNF233A6NK53 670 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 PNPLA4P41247 253 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 GPC5P78333 572 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 TCF15Q12870 199 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 SLC39A12Q504Y0 691 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 LMBRD2Q68DH5 695 aaPredicted RBP23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 PAGE5Q96GU1 130 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 MTMR12Q9C0I1 747 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 ZCWPW1Q9H0M4 648 aa23.13■■□□□ 1.29
PPP4R1-228ENST00000584074 SLC2A4RGQ9NR83 387 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms