RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 MORF4L1Q9UBU8 362 aa20.73■□□□□ 0.91
CDH5-204ENST00000563425 PCDHGC3Q9UN70 934 aa20.73■□□□□ 0.91
CDH5-204ENST00000563425 ATP8A1Q9Y2Q0 1164 aa20.73■□□□□ 0.91
CDH5-204ENST00000563425 A6NNZ2 444 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 CALB1P05937 261 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 GTF2A2P52657 109 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 TAS2R40P59535 323 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 YWHAEP62258 255 aaKnown RBP20.72■□□□□ 0.91
CDH5-204ENST00000563425 AMHR2Q16671 573 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 TUBB8Q3ZCM7 444 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 DNAJC21Q5F1R6 531 aaKnown RBP20.72■□□□□ 0.91
CDH5-204ENST00000563425 DAB2IPQ5VWQ8 1189 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 RUFY4Q6ZNE9 571 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 TMEM192Q8IY95 271 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 KATNAL2Q8IYT4 538 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 TMEM35BQ8NCS4 154 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 AFG1LQ8WV93 481 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 ZNF518BQ9C0D4 1074 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 ECEL1O95672 775 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 MCF2P10911 925 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 NR1D1P20393 614 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 CDH5P33151 784 aaPredicted RBP20.72■□□□□ 0.91
CDH5-204ENST00000563425 GCLCP48506 637 aaPredicted RBP20.72■□□□□ 0.91
CDH5-204ENST00000563425 LLGL1Q15334 1064 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 ZNF394Q53GI3 561 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 C1orf54Q8WWF1 131 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 HERPUD2Q9BSE4 406 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 C16orf70Q9BSU1 422 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 FAM129AQ9BZQ8 928 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 IP6K2Q9UHH9 426 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 PTPN22Q9Y2R2 807 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 TRIP11Q15643 1979 aa20.72■□□□□ 0.91
CDH5-204ENST00000563425 GRIN2DO15399 1336 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 A0A087WZ62 844 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 CCL15-CCL14A0A0B4J2E2 113 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 TCRBV5S1A1TA0A578 114 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 SNAI1O95863 264 aaPredicted RBP20.71■□□□□ 0.91
CDH5-204ENST00000563425 ADCYAP1R1P41586 468 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 TNFAIP2Q03169 654 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 CCL15Q16663 113 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 SCARA5Q6ZMJ2 495 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 TFAP2BQ92481 460 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 PKNOX2Q96KN3 472 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 FDXACB1Q9BRP7 624 aaPredicted RBP20.71■□□□□ 0.91
CDH5-204ENST00000563425 ZNF408Q9H9D4 720 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 CWC15Q9P013 229 aaKnown RBP20.71■□□□□ 0.91
CDH5-204ENST00000563425 SIX4Q9UIU6 781 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 IVNS1ABPQ9Y6Y0 642 aa20.71■□□□□ 0.91
CDH5-204ENST00000563425 TMEM191CA6NGB0 347 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 O00370 1275 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 GJB6O95452 261 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 ZNF286BP0CG31 522 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 STAG3L1P0CL83 205 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 EIF4BP23588 611 aaKnown RBP20.7■□□□□ 0.91
CDH5-204ENST00000563425 PMS2P54278 862 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 GNGT1P63211 74 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 ANKRD23Q86SG2 305 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 BRI3BPQ8WY22 251 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 ART4Q93070 314 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 BCO2Q9BYV7 579 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 EPB41L4BQ9H329 900 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 PDZD7Q9H5P4 517 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 MTRF1LQ9UGC7 380 aaKnown RBP20.7■□□□□ 0.91
CDH5-204ENST00000563425 POLIQ9UNA4 740 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 AKT3Q9Y243 479 aa20.7■□□□□ 0.91
CDH5-204ENST00000563425 LACTBL1A8MY62 500 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 MEFVO15553 781 aaPredicted RBP20.7■□□□□ 0.9
CDH5-204ENST00000563425 PPFIA4O75335 1185 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 NFICP08651 508 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 EIF3BP55884 814 aaKnown RBP20.7■□□□□ 0.9
CDH5-204ENST00000563425 RPL7AP62424 266 aaKnown RBP20.7■□□□□ 0.9
CDH5-204ENST00000563425 KLF1Q13351 362 aaPredicted RBP20.7■□□□□ 0.9
CDH5-204ENST00000563425 AGBL2Q5U5Z8 902 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 WDTC1Q8N5D0 677 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 EXD1Q8NHP7 514 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 FAXDC2Q96IV6 333 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 DCLK3Q9C098 648 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 PABPC3Q9H361 631 aaKnown RBP20.7■□□□□ 0.9
CDH5-204ENST00000563425 CHST7Q9NS84 486 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 NXF1Q9UBU9 619 aaKnown RBP20.7■□□□□ 0.9
CDH5-204ENST00000563425 LCMT1Q9UIC8 334 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 CLEC11AQ9Y240 323 aa20.7■□□□□ 0.9
CDH5-204ENST00000563425 EIF3HO15372 352 aaKnown RBP eCLIP20.69■□□□□ 0.9
CDH5-204ENST00000563425 CSDE1O75534 798 aaKnown RBP20.69■□□□□ 0.9
CDH5-204ENST00000563425 TMOD1P28289 359 aa20.69■□□□□ 0.9
CDH5-204ENST00000563425 ATP1A2P50993 1020 aa20.69■□□□□ 0.9
CDH5-204ENST00000563425 PPP1R7Q15435 360 aa20.69■□□□□ 0.9
CDH5-204ENST00000563425 ZNF667Q5HYK9 610 aa20.69■□□□□ 0.9
CDH5-204ENST00000563425 SYDE1Q6ZW31 735 aaPredicted RBP20.69■□□□□ 0.9
CDH5-204ENST00000563425 C1orf127Q8N9H9 656 aa20.69■□□□□ 0.9
CDH5-204ENST00000563425 USTQ9Y2C2 406 aa20.69■□□□□ 0.9
CDH5-204ENST00000563425 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.68■□□□□ 0.9
CDH5-204ENST00000563425 VTNP04004 478 aa20.68■□□□□ 0.9
CDH5-204ENST00000563425 KRT19P08727 400 aa20.68■□□□□ 0.9
CDH5-204ENST00000563425 NUDT17P0C025 328 aa20.68■□□□□ 0.9
CDH5-204ENST00000563425 RALAP11233 206 aa20.68■□□□□ 0.9
CDH5-204ENST00000563425 KRT17Q04695 432 aa20.68■□□□□ 0.9
CDH5-204ENST00000563425 SNX1Q13596 522 aa20.68■□□□□ 0.9
CDH5-204ENST00000563425 PPP1R15BQ5SWA1 713 aa20.68■□□□□ 0.9
CDH5-204ENST00000563425 DNAJC24Q6P3W2 148 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms