RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SGPL1O95470 568 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 LSM3P62310 102 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RGS20O76081 388 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ENO2P09104 434 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ETS2P15036 469 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 LIG4P49917 911 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 USH1GQ495M9 461 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 BTN2A1Q7KYR7 527 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 VPS8Q8N3P4 1428 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TMEM120AQ9BXJ8 343 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 KMT5AQ9NQR1 393 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 USP12O75317 370 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ATP6V1G1O75348 118 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 IFNA16P05015 189 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 HERVK_113P62684 666 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 LGALS3BPQ08380 585 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ARMCX4Q5H9R4 360 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RNF43Q68DV7 783 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 LRRC74BQ6ZQY2 392 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ADPGKQ9BRR6 497 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PIDD1Q9HB75 910 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TMEM260Q9NX78 707 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 WDR37Q9Y2I8 494 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TFEBP19484 476 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 DDB1Q16531 1140 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 GALNT6Q8NCL4 622 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 DENND2DQ9H6A0 471 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 FAM217BQ9NTX9 383 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 MRPL11Q9Y3B7 192 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 K7ERI5 159 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 CNOT3O75175 753 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 YY1P25490 414 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 CHRNDQ07001 517 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ARHGEF16Q5VV41 709 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RWDD4Q6NW29 188 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PTF1AQ7RTS3 328 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF571Q7Z3V5 609 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 DHFR2Q86XF0 187 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 BPIFB6Q8NFQ5 453 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 C3orf70A6NLC5 250 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 O00370 1275 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 USP17L8P0C7I0 530 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RC3H1Q5TC82 1133 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SULF1Q8IWU6 871 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ATP11CQ8NB49 1132 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PCYOX1LQ8NBM8 494 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ATP8B4Q8TF62 1192 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 OXNAD1Q96HP4 312 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PCMTD2Q9NV79 361 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RSL24D1Q9UHA3 163 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SLC8A2Q9UPR5 921 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 DNAJC16Q9Y2G8 782 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PTPAQ15257 358 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PPM1LQ5SGD2 360 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RWDD3Q9Y3V2 267 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 NMT2O60551 498 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PROCP04070 461 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 LINGO3P0C6S8 592 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ADSSP30520 456 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 XRCC4Q13426 336 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RBM20Q5T481 1227 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 KRT39Q6A163 491 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 FAM213AQ9BRX8 229 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 GINM1Q9NU53 330 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PHF8Q9UPP1 1060 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TTLL3Q9Y4R7 772 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RTL9Q8NET4 1388 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PYGLP06737 847 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 AKAP4Q5JQC9 854 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SLC10A5Q5PT55 438 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RRM2BQ7LG56 351 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 POC5Q8NA72 575 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 NLRP4Q96MN2 994 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 DNAJC7Q99615 494 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TRIM45Q9H8W5 580 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 MAGEE1Q9HCI5 957 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RAB6BQ9NRW1 208 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 HESX1Q9UBX0 185 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PLEKHG2Q9H7P9 1386 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 CADPSQ9ULU8 1353 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SOAT2O75908 522 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ASMTLO95671 621 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SLC2A4P14672 509 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 HOXA13P31271 388 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 ETFBP38117 255 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 BFSP2Q13515 415 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TRAPPC3LQ5T215 181 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 IQSEC1Q6DN90 963 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 TMEM270Q6UE05 265 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 UNC5AQ6ZN44 842 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 RORBQ92753 470 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 CEP295NLQ96MC4 621 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 SEC16AO15027 2179 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PDE9AO76083 593 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 NELFEP18615 380 aaKnown RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PPP6R3Q5H9R7 873 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-248ENST00000558190 POTEAQ6S8J7 498 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 PSMA8Q8TAA3 256 aa3.85□□□□□ -1.79
ATXN3-248ENST00000558190 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms