RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 USP37Q86T82 979 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 CCDC33Q8N5R6 958 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 PDPRQ8NCN5 879 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 MIEF2Q96C03 454 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 BRIP1Q9BX63 1249 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 TLR10Q9BXR5 811 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 ZNF518BQ9C0D4 1074 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 WDR12Q9GZL7 423 aaKnown RBP6.32□□□□□ -1.4
SYNE2-210ENST00000553455 POGKQ9P215 609 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 PLEKHM1Q9Y4G2 1056 aa6.32□□□□□ -1.4
SYNE2-210ENST00000553455 M0QYG6 137 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 FGF18O76093 207 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 CHEK2O96017 543 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 GRPP07492 148 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 PIM1P11309 404 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-210ENST00000553455 FCER1AP12319 257 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 GCSHP23434 173 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 MGAT1P26572 445 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 PPM1AP35813 382 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 UCP3P55916 312 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 NAIF1Q69YI7 327 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-210ENST00000553455 Q6ZSN1 163 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 CIR1Q86X95 450 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-210ENST00000553455 SIAH1Q8IUQ4 282 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 SLC17A8Q8NDX2 589 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 OR56A3Q8NH54 315 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 POF1BQ8WVV4 589 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
SYNE2-210ENST00000553455 BRI3BPQ8WY22 251 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 DDX17Q92841 729 aaKnown RBP6.31□□□□□ -1.4
SYNE2-210ENST00000553455 CRB3Q9BUF7 120 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 IMPG2Q9BZV3 1241 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 VPS11Q9H270 941 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 VSX1Q9NZR4 365 aaPredicted RBP6.31□□□□□ -1.4
SYNE2-210ENST00000553455 PCDHGB2Q9Y5G2 931 aa6.31□□□□□ -1.4
SYNE2-210ENST00000553455 PATE3B3GLJ2 98 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 F5H423 210 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-210ENST00000553455 LEFTY2O00292 366 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 APOL1O14791 398 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 TCEA3O75764 348 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 KIF20AO95235 890 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 FDXRP22570 491 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 POU6F2P78424 691 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-210ENST00000553455 RAB32Q13637 225 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 FAM102AQ5T9C2 384 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-210ENST00000553455 LMBRD2Q68DH5 695 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-210ENST00000553455 ANKRD35Q8N283 1001 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 ZNF808Q8N4W9 903 aaPredicted RBP6.3□□□□□ -1.4
SYNE2-210ENST00000553455 DNAJC5GQ8N7S2 189 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 ATP11CQ8NB49 1132 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 DNERQ8NFT8 737 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 NUP133Q8WUM0 1156 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 PHACTR3Q96KR7 559 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 SELENOOQ9BVL4 669 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 ARFGAP3Q9NP61 516 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 GJB4Q9NTQ9 266 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 MYO1AQ9UBC5 1043 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 CDC23Q9UJX2 597 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 PAXBP1Q9Y5B6 917 aa6.3□□□□□ -1.4
SYNE2-210ENST00000553455 CCDC78A2IDD5 438 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 MBD3L4A6NDZ8 208 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-210ENST00000553455 MBD3L3A6NE82 208 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-210ENST00000553455 CAPN14A8MX76 684 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 PYCARD-AS1I3L0S3 204 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 MT-ND5P03915 603 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 HARSP12081 509 aaKnown RBP6.29□□□□□ -1.4
SYNE2-210ENST00000553455 CKBP12277 381 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 FGFR2P21802 821 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 TOB1P50616 345 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-210ENST00000553455 SLC35G1Q2M3R5 365 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 TUBB8Q3ZCM7 444 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 UBXN11Q5T124 520 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 AGAP9Q5VTM2 703 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 DCAF12L1Q5VU92 463 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 MAMDC4Q6UXC1 1216 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 SPOCD1Q6ZMY3 1216 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 Q6ZRM9 215 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 RHOT2Q8IXI1 618 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 SLC15A4Q8N697 577 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 FAM46DQ8NEK8 389 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 Q8TCH9 128 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 SNX22Q96L94 193 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 TEPSINQ96N21 525 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 RBM15Q96T37 977 aaKnown RBP eCLIP6.29□□□□□ -1.4
SYNE2-210ENST00000553455 SPATA5L1Q9BVQ7 753 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 ZCCHC4Q9H5U6 513 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 PARD6AQ9NPB6 346 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 ETAA1Q9NY74 926 aa6.29□□□□□ -1.4
SYNE2-210ENST00000553455 RGS17Q9UGC6 210 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-210ENST00000553455 ANXA2P07355 339 aaKnown RBP6.28□□□□□ -1.4
SYNE2-210ENST00000553455 COMTP21964 271 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 KLRC1P26715 233 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 NHLH2Q02577 135 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 BOP1Q14137 746 aaKnown RBP6.28□□□□□ -1.4
SYNE2-210ENST00000553455 MPEG1Q2M385 716 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 SLC44A4Q53GD3 710 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 FAM160B1Q5W0V3 765 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 GLB1LQ6UWU2 654 aa6.28□□□□□ -1.4
SYNE2-210ENST00000553455 CFAP52Q8N1V2 620 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms