RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 SPTLC1O15269 473 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 MBTPS2O43462 519 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 AKAP3O75969 853 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 BMP1P13497 986 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 RPL17P18621 184 aaKnown RBP19.25■□□□□ 0.67
TSFM-208ENST00000543727 BMP6P22004 513 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 HOXA9P31269 272 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 OR1D2P34982 312 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 VAMP7P51809 220 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 BFSP1Q12934 665 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 SMAD2Q15796 467 aaKnown RBP19.25■□□□□ 0.67
TSFM-208ENST00000543727 UVSSAQ2YD98 709 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 ANKRD40Q6AI12 368 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 SYCE2Q6PIF2 218 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 ZNF461Q8TAF7 563 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 BORCS6Q96GS4 357 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 CEP63Q96MT8 703 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 ADAM7Q9H2U9 754 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 FBXL5Q9UKA1 691 aa19.25■□□□□ 0.67
TSFM-208ENST00000543727 TCF20Q9UGU0 1960 aaKnown RBP19.24■□□□□ 0.67
TSFM-208ENST00000543727 SPDYE4A6NLX3 237 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 PPP1R3GB7ZBB8 358 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 TULP1O00294 542 aaPredicted RBP19.24■□□□□ 0.67
TSFM-208ENST00000543727 STX10O60499 249 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 HUS1O60921 280 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 POU2F2P09086 479 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 HNRNPA1P09651 372 aaKnown RBP eCLIP19.24■□□□□ 0.67
TSFM-208ENST00000543727 GTF2H1P32780 548 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 RBM10P98175 930 aaKnown RBP19.24■□□□□ 0.67
TSFM-208ENST00000543727 PAK1Q13153 545 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 TRPC3Q13507 836 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 LIN9Q5TKA1 542 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 LMBRD2Q68DH5 695 aaPredicted RBP19.24■□□□□ 0.67
TSFM-208ENST00000543727 CCDC149Q6ZUS6 474 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 TOP6BLQ8N6T0 577 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 MLKLQ8NB16 471 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 SUSD6Q92537 303 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 SYAP1Q96A49 352 aaPredicted RBP19.24■□□□□ 0.67
TSFM-208ENST00000543727 HPDLQ96IR7 371 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 RIPOR3Q96MK2 946 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 S1PR5Q9H228 398 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 VRTNQ9H8Y1 702 aa19.24■□□□□ 0.67
TSFM-208ENST00000543727 BIN1O00499 593 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 ABLIM3O94929 683 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 FGFR1OPO95684 399 aaKnown RBP19.23■□□□□ 0.67
TSFM-208ENST00000543727 FAM163BP0C2L3 166 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 CD44P16070 742 aaKnown RBP19.23■□□□□ 0.67
TSFM-208ENST00000543727 MTHFRP42898 656 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 KCNQ1P51787 676 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 ROR1Q01973 937 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 SMARCB1Q12824 385 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 ZACNQ401N2 412 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 ISM2Q6H9L7 571 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 PALB2Q86YC2 1186 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 GLYCTKQ8IVS8 523 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 THEM5Q8N1Q8 247 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 TMEM130Q8N3G9 435 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 KREMEN2Q8NCW0 462 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 PLEKHO2Q8TD55 490 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 NELFBQ8WX92 580 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 POP1Q99575 1024 aaKnown RBP19.23■□□□□ 0.67
TSFM-208ENST00000543727 METTL14Q9HCE5 456 aaKnown RBP19.23■□□□□ 0.67
TSFM-208ENST00000543727 DACH1Q9UI36 760 aa19.23■□□□□ 0.67
TSFM-208ENST00000543727 USP15Q9Y4E8 981 aaPredicted RBP19.23■□□□□ 0.67
TSFM-208ENST00000543727 SPTBN5Q9NRC6 3674 aaKnown RBP19.22■□□□□ 0.67
TSFM-208ENST00000543727 PHACTR2O75167 634 aa19.22■□□□□ 0.67
TSFM-208ENST00000543727 C4BPAP04003 597 aaKnown RBP19.22■□□□□ 0.67
TSFM-208ENST00000543727 ATF2P15336 505 aa19.22■□□□□ 0.67
TSFM-208ENST00000543727 BIRC3Q13489 604 aa19.22■□□□□ 0.67
TSFM-208ENST00000543727 CT47A1Q5JQC4 288 aaPredicted RBP19.22■□□□□ 0.67
TSFM-208ENST00000543727 TTI2Q6NXR4 508 aa19.22■□□□□ 0.67
TSFM-208ENST00000543727 GPT2Q8TD30 523 aa19.22■□□□□ 0.67
TSFM-208ENST00000543727 ZNF516Q92618 1163 aa19.22■□□□□ 0.67
TSFM-208ENST00000543727 TAF4BQ92750 862 aa19.22■□□□□ 0.67
TSFM-208ENST00000543727 HSFX1Q9UBD0 423 aa19.22■□□□□ 0.67
TSFM-208ENST00000543727 AFF4Q9UHB7 1163 aaKnown RBP19.22■□□□□ 0.67
TSFM-208ENST00000543727 WDR27A2RRH5 827 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 ADAM12O43184 909 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 ZMYND10O75800 440 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 GNA14O95837 355 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 CPB1P15086 417 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 PTMSP20962 102 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 LHX1P48742 406 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 PMS1P54277 932 aaKnown RBP19.21■□□□□ 0.67
TSFM-208ENST00000543727 CBX2Q14781 532 aaPredicted RBP19.21■□□□□ 0.67
TSFM-208ENST00000543727 CLUL1Q15846 466 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 TDRD10Q5VZ19 366 aaKnown RBP19.21■□□□□ 0.67
TSFM-208ENST00000543727 KLHL10Q6JEL2 608 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 RSPO2Q6UXX9 243 aaPredicted RBP19.21■□□□□ 0.67
TSFM-208ENST00000543727 RBM43Q6ZSC3 357 aaKnown RBP19.21■□□□□ 0.67
TSFM-208ENST00000543727 LIMS2Q7Z4I7 341 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 FRMD5Q7Z6J6 570 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 FILIP1Q7Z7B0 1213 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 GPR149Q86SP6 731 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 TCEAL8Q8IYN2 117 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 PDCL2Q8N4E4 241 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 C2orf15Q8WU43 125 aaKnown RBP19.21■□□□□ 0.67
TSFM-208ENST00000543727 ARMCX3Q9UH62 379 aaPredicted RBP19.21■□□□□ 0.67
TSFM-208ENST00000543727 RWDD2AQ9UIY3 292 aa19.21■□□□□ 0.67
TSFM-208ENST00000543727 CTNND2Q9UQB3 1225 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms