RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SERPINB4P48594 390 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 CASP5P51878 434 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 IL9RQ01113 521 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 PLOD1Q02809 727 aaPredicted RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 DRAP1Q14919 205 aaPredicted RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 WASHC2DQ5SRD0 308 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 C11orf63Q6NUN7 778 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 PHLDB2Q86SQ0 1253 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 TMEM110Q86TL2 294 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 SFR1Q86XK3 245 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 RAVER1Q8IY67 606 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 THNSL1Q8IYQ7 743 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 CYP4X1Q8N118 509 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 ENDOVQ8N8Q3 282 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 ANKLE1Q8NAG6 615 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 FAM13CQ8NE31 585 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 NLRP7Q8WX94 980 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 HAS1Q92839 578 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 CENPOQ9BU64 300 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 STK33Q9BYT3 514 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 DHX36Q9H2U1 1008 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 JMJD4Q9H9V9 463 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 TYW1Q9NV66 732 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 PCDHA3Q9Y5H8 950 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 TPRP12270 2363 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 MAPK13O15264 365 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 DCTN3O75935 186 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 EYA4O95677 639 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 IMPDH2P12268 514 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 DPEP1P16444 411 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 RASSF2P50749 326 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 HUNKP57058 714 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 CTTNQ14247 550 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 OLFML2BQ68BL8 750 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 SNRNP48Q6IEG0 339 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 IRGCQ6NXR0 463 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 DUS1LQ6P1R4 473 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 OLIG1Q8TAK6 271 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 MAIP1Q8WWC4 291 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 KRT35Q92764 455 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 SRPK1Q96SB4 655 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 RMDN3Q96TC7 470 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 BRD8Q9H0E9 1235 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 HAO1Q9UJM8 370 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 DNAJC12Q9UKB3 198 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 ASB3Q9Y575 518 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 LCTP09848 1927 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 ADGRA3Q8IWK6 1321 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 TNPO2O14787 897 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 MAFGO15525 162 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 SLC26A4O43511 780 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 PTDSS1P48651 473 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 MARCKSL1P49006 195 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 CASP4P49662 377 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 ZNF157P51786 506 aaPredicted RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 ZBTB16Q05516 673 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 ZNF543Q08ER8 600 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 TSTA3Q13630 321 aaPredicted RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 TAF1CQ15572 869 aaPredicted RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 CCDC6Q16204 474 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 ANGEL2Q5VTE6 544 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 OR52E8Q6IFG1 317 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 TTBK2Q6IQ55 1244 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 SH3TC2Q8TF17 1288 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 LRRC37BQ96QE4 947 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 HESX1Q9UBX0 185 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 ASIC3Q9UHC3 531 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 COG5Q9UP83 839 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 RABGAP1Q9Y3P9 1069 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 POTEFA5A3E0 1075 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 A6NJR5 290 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 NVLO15381 856 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 THAP12O43422 761 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 SLC4A1P02730 911 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 POTEIP0CG38 1075 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 TAC1P20366 129 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 CYP2B6P20813 491 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 GSTT1P30711 240 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 KCNJ1P48048 391 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 HADHBP55084 474 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 MCL1Q07820 350 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 DMP1Q13316 513 aaPredicted RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 CYP1B1Q16678 543 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 SYDE2Q5VT97 1194 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 PPP1R18Q6NYC8 613 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 ZNF449Q6P9G9 518 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 POTEEQ6S8J3 1075 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 RNF207Q6ZRF8 634 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 SLC13A5Q86YT5 568 aaPredicted RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 SRRM1Q8IYB3 904 aaKnown RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 RBBP8NLQ8NC74 664 aaPredicted RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 DTX3LQ8TDB6 740 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 PRMT6Q96LA8 375 aaPredicted RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 FGD4Q96M96 766 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 SUDS3Q9H7L9 328 aaPredicted RBP5.52□□□□□ -1.53
PROM1-220ENST00000540805 TAS2R14Q9NYV8 317 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 WHRNQ9P202 907 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 STOML1Q9UBI4 398 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 SCOCQ9UIL1 159 aa5.52□□□□□ -1.53
PROM1-220ENST00000540805 MAGED2Q9UNF1 606 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms