RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 STRIP1Q5VSL9 837 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 TMPRSS9Q7Z410 1059 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 ZNF575Q86XF7 245 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 PPP1R3BQ86XI6 285 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 PRIMA1Q86XR5 153 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 CELF5Q8N6W0 485 aaKnown RBP4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 NTN5Q8WTR8 489 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 TRIB1Q96RU8 372 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 BRD9Q9H8M2 597 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 INTS13Q9NVM9 706 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 ETAA1Q9NY74 926 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 LRIT1Q9P2V4 623 aa4.45□□□□□ -1.7
HMGB1P29-201ENST00000505659 POLRMTO00411 1230 aaKnown RBP4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 YY2O15391 372 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 DTNBO60941 627 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 VPS4BO75351 444 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 KIF20AO95235 890 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 PPP3CBP16298 524 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 PIK3CGP48736 1102 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 ZNF267Q14586 743 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 FBXO42Q6P3S6 717 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 VWA1Q6PCB0 445 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 FAM98AQ8NCA5 519 aaKnown RBP4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 TOR1AIP2Q8NFQ8 470 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 MYCBPAPQ8TBZ2 947 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 TFAP2BQ92481 460 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 TNPO1Q92973 898 aaKnown RBP4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 SCAMP4Q969E2 229 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 MRPL46Q9H2W6 279 aaKnown RBP4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 RSAD1Q9HA92 442 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 KIAA1586Q9HCI6 787 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 MAN1C1Q9NR34 630 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 IL17RBQ9NRM6 502 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 LMBRD1Q9NUN5 540 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 SIDT1Q9NXL6 827 aaKnown RBP4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 TLK1Q9UKI8 766 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 PCDHA1Q9Y5I3 950 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 SPATA31A6Q5VVP1 1343 aa4.44□□□□□ -1.7
HMGB1P29-201ENST00000505659 PEX1O43933 1283 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 ALDH1L1O75891 902 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 ABLIM3O94929 683 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 CHRM2P08172 466 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 GNAI3P08754 354 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 ELFN1P0C7U0 828 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 RARBP10826 455 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 TYRP14679 529 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 CYP2C19P33261 490 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 RARRES1P49788 294 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 MAPK10P53779 464 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 ANAPC15P60006 121 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 GNAI1P63096 354 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 POU6F2P78424 691 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 PIGFQ07326 219 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 MCL1Q07820 350 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 KIF22Q14807 665 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 TTF1Q15361 905 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 PGS1Q32NB8 556 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 DPY19L2P1Q6NXN4 242 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 TAF2Q6P1X5 1199 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 RD3Q7Z3Z2 195 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 PEG10Q86TG7 708 aaKnown RBP4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 PDSS2Q86YH6 399 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 AOPEPQ8N6M6 819 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 PSD4Q8NDX1 1056 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 SNX19Q92543 992 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 MVB12AQ96EY5 273 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 FBXL20Q96IG2 436 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 PDLIM2Q96JY6 352 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 SMOQ99835 787 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 RTFDC1Q9BY42 306 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 RHOBTB2Q9BYZ6 727 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 TINAGL1Q9GZM7 467 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 DDX56Q9NY93 547 aaKnown RBP4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 FEZ2Q9UHY8 353 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 DMTF1Q9Y222 760 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 POLHQ9Y253 713 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 INSL6Q9Y581 213 aa4.43□□□□□ -1.7
HMGB1P29-201ENST00000505659 LOC105371045A0A1W2PR82 267 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 VWC2LB2RUY7 222 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 ADM5C9JUS6 153 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 ANXA1P04083 346 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 ALDH2P05091 517 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 RHOP08100 348 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 PDGFRBP09619 1106 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 SRGNP10124 158 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 FOLR3P41439 243 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 NPTX2P47972 431 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 TOB1P50616 345 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 EXOSC9Q06265 439 aaKnown RBP4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 BOP1Q14137 746 aaKnown RBP4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 HABP2Q14520 560 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 ERCC6LQ2NKX8 1250 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 MICALCLQ6ZW33 695 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 ARHGEF25Q86VW2 580 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 RAVER1Q8IY67 606 aaKnown RBP4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 GRAMD1CQ8IYS0 662 aa4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 FAM9AQ8IZU1 332 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 BOLLQ8N9W6 283 aaKnown RBP4.42□□□□□ -1.7
HMGB1P29-201ENST00000505659 POC1BQ8TC44 478 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms