RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CCDC195A0A1B0GUA6 201 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 NPIPB8E9PQR5 432 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 MYO1CO00159 1063 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 TPP1O14773 563 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 PRC1O43663 620 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZBED1O96006 694 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 ADH4P08319 380 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 KITP10721 976 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 HDCP19113 662 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 SLC7A1P30825 629 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 MCM7P33993 719 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 BMPR1AP36894 532 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 FAM193AP78312 1265 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 PTPAQ15257 358 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 AMOTQ4VCS5 1084 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 EMC10Q5UCC4 262 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 RNF220Q5VTB9 566 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 USP51Q70EK9 711 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 CLNKQ7Z7G1 428 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 USP37Q86T82 979 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 KIAA0319LQ8IZA0 1049 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 TIFAQ96CG3 184 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZMAT3Q9HA38 289 aaKnown RBP6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 GALNT9Q9HCQ5 603 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 HSFX1Q9UBD0 423 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 TESQ9UGI8 421 aaKnown RBP6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 L1RE1Q9UN81 338 aa6.09□□□□□ -1.43
HMGB1P38-201ENST00000490557 UNC119BA6NIH7 251 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 GOLIM4O00461 696 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 CAND2O75155 1236 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 VPS4BO75351 444 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 KIF20AO95235 890 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 KRT18P05783 430 aaKnown RBP6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 KCNA2P16389 499 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 TACR2P21452 398 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 NR4A1P22736 598 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 FPGSQ05932 587 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 ABHD18Q0P651 414 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 HLTFQ14527 1009 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 CRB2Q5IJ48 1285 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 B3GNTL1Q67FW5 361 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 SLC30A10Q6XR72 485 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 ZNF783Q6ZMS7 281 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 CHST15Q7LFX5 561 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 CELF5Q8N6W0 485 aaKnown RBP6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 NSUN7Q8NE18 718 aaKnown RBP6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 LRTOMTQ8WZ04 291 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 LENG9Q96B70 501 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 MMRN2Q9H8L6 949 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 SRRDQ9UH36 339 aa6.08□□□□□ -1.44
HMGB1P38-201ENST00000490557 TRGV11A0A075B6L2 103 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 PRSS29PA6NIE9 313 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 A6NNZ2 444 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 UNC5CO95185 931 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 HRGP04196 525 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 ELANEP08246 267 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 C6P13671 934 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 RHCEP18577 417 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 TNFRSF1AP19438 455 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 USP14P54578 494 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 KRTAP10-2P60368 255 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 POU6F2P78424 691 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 SATB1Q01826 763 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 RHDQ02161 417 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 SLC44A4Q53GD3 710 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 FAM46DQ8NEK8 389 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 OR6B3Q8NGW1 331 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 KBTBD7Q8WVZ9 684 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 TMEM125Q96AQ2 219 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 SUCLG2Q96I99 432 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 BOD1Q96IK1 185 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 P2RX7Q99572 595 aaKnown RBP6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 LRRC27Q9C0I9 530 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 GPRC5BQ9NZH0 403 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 ANKFY1Q9P2R3 1169 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 PLEKHM1Q9Y4G2 1056 aa6.07□□□□□ -1.44
HMGB1P38-201ENST00000490557 MYADML2A6NDP7 307 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 TMEM200CA6NKL6 621 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 MARCH11A6NNE9 402 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 E9PLN8 166 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 TBC1D4O60343 1298 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 LPXNO60711 386 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 FZD7O75084 574 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 MAP4K4O95819 1239 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 GRPP07492 148 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 PIM1P11309 404 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 BRAFP15056 766 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 NPR1P16066 1061 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 PEX2P28328 305 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 RPS7P62081 194 aaKnown RBP6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 GEN1Q17RS7 908 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 FAM160B1Q5W0V3 765 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 CRIP3Q6Q6R5 217 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 LAYNQ6UX15 382 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 KSR2Q6VAB6 950 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 NOL8Q76FK4 1167 aaKnown RBP6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 LCORLQ8N3X6 602 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 PSD4Q8NDX1 1056 aa6.06□□□□□ -1.44
HMGB1P38-201ENST00000490557 MRGPRX1Q96LB2 322 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms