RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 EIF4HQ15056 248 aaKnown RBP5.37□□□□□ -1.55
VPS13A-211ENST00000484581 SLC4A8Q2Y0W8 1093 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 ZACNQ401N2 412 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 KLHDC7AQ5VTJ3 777 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 BEND5Q7L4P6 421 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 TRMT2AQ8IZ69 625 aaKnown RBP5.37□□□□□ -1.55
VPS13A-211ENST00000484581 PPHLN1Q8NEY8 458 aaKnown RBP5.37□□□□□ -1.55
VPS13A-211ENST00000484581 OR6B3Q8NGW1 331 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 GFM2Q969S9 779 aaKnown RBP5.37□□□□□ -1.55
VPS13A-211ENST00000484581 ZNF566Q969W8 418 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 IQCDQ96DY2 449 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 CARD11Q9BXL7 1154 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 EIF2AQ9BY44 585 aaKnown RBP5.37□□□□□ -1.55
VPS13A-211ENST00000484581 SENP6Q9GZR1 1112 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-211ENST00000484581 SIDT1Q9NXL6 827 aaKnown RBP5.37□□□□□ -1.55
VPS13A-211ENST00000484581 RRN3Q9NYV6 651 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 GPRC5DQ9NZD1 345 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 AJAP1Q9UKB5 411 aaPredicted RBP5.37□□□□□ -1.55
VPS13A-211ENST00000484581 GJD2Q9UKL4 321 aa5.37□□□□□ -1.55
VPS13A-211ENST00000484581 TRIM43BA6NCK2 446 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 SYT5O00445 386 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 HNRNPDLO14979 420 aaKnown RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 NCAM2O15394 837 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 ADCY6O43306 1168 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 ALDH1A2O94788 518 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 ANXA2P07355 339 aaKnown RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 CASP2P42575 452 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 ETV4P43268 484 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 PIK3CGP48736 1102 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 STAT5BP51692 787 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 RAC3P60763 192 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 RPS16P62249 146 aaKnown RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 GALNT1Q10472 559 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 FOXO1Q12778 655 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 FOXD4Q12950 439 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 KLF10Q13118 480 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 TBX2Q13207 712 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 FOXE3Q13461 319 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 CYP26C1Q6V0L0 522 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 ZNF783Q6ZMS7 281 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 PDZD4Q76G19 769 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 CLEC14AQ86T13 490 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 CLASRPQ8N2M8 674 aaKnown RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 TXLNBQ8N3L3 684 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 LILRA3Q8N6C8 439 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 MAML1Q92585 1016 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 TRIM43Q96BQ3 446 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 TBC1D20Q96BZ9 403 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 NEIL1Q96FI4 390 aaPredicted RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 P2RX7Q99572 595 aaKnown RBP5.36□□□□□ -1.55
VPS13A-211ENST00000484581 KATNBL1Q9H079 304 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 LDAHQ9H6V9 325 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 SACM1LQ9NTJ5 587 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 PDP2Q9P2J9 529 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 ZDHHC8Q9ULC8 765 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 SCINQ9Y6U3 715 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 KAT6BQ8WYB5 2073 aa5.36□□□□□ -1.55
VPS13A-211ENST00000484581 A0A1B0GVC2 190 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 CLCA1A8K7I4 914 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 NPIPB8E9PQR5 432 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 TEX33O43247 280 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 MTSS1O43312 755 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 ITGA10O75578 1167 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 AGR2O95994 175 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 AHSGP02765 367 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 CD1AP06126 327 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 FAM163BP0C2L3 166 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 DHRS4L1P0CG22 281 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 IL2RBP14784 551 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 GYPEP15421 78 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 COMTP21964 271 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 PCSK1P29120 753 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 FLT3LGP49771 235 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 GEMIN4P57678 1058 aaKnown RBP5.35□□□□□ -1.55
VPS13A-211ENST00000484581 TGFB2P61812 414 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 SP140Q13342 867 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 TOP3AQ13472 1001 aaPredicted RBP5.35□□□□□ -1.55
VPS13A-211ENST00000484581 PRKG1Q13976 671 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 ATP2B3Q16720 1220 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 PFKFB4Q16877 469 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 C3orf38Q5JPI3 329 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 MZT2AQ6P582 158 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 CATSPERGQ6ZRH7 1159 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 RFX8Q6ZV50 586 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 PLXDC1Q8IUK5 500 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 NAXEQ8NCW5 288 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 CYP2W1Q8TAV3 490 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 SNX22Q96L94 193 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 PPM1MQ96MI6 270 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 C1orf43Q9BWL3 253 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 MAGEH1Q9H213 219 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 SMURF2Q9HAU4 748 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 TM7SF3Q9NS93 570 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 GRHPRQ9UBQ7 328 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 RGS17Q9UGC6 210 aaPredicted RBP5.35□□□□□ -1.55
VPS13A-211ENST00000484581 SLC39A10Q9ULF5 831 aa5.35□□□□□ -1.55
VPS13A-211ENST00000484581 ACKR2O00590 384 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 NPC1O15118 1278 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 THAP12O43422 761 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 TBC1D4O60343 1298 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms