RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PRR5-ARHGAP8B1AHC4 643 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 GPR42O15529 346 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 PIP5K1CO60331 668 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 MT-ND5P03915 603 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 GNAI2P04899 355 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 PIM1P11309 404 aaPredicted RBP7.24□□□□□ -1.25
VPS50-212ENST00000476413 TYRP1P17643 537 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 HSPA7P48741 367 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 CHN2P52757 468 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 UCP3P55916 312 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 MPEG1Q2M385 716 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 NOMO2Q5JPE7 1267 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 SPTY2D1Q68D10 685 aaPredicted RBP7.24□□□□□ -1.25
VPS50-212ENST00000476413 EFCAB12Q6NXP0 572 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 MED25Q71SY5 747 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 DNAJC5GQ8N7S2 189 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 PDPRQ8NCN5 879 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 TBC1D15Q8TC07 691 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 SNX22Q96L94 193 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 TOX2Q96NM4 488 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 TLR10Q9BXR5 811 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 SPON1Q9HCB6 807 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 VSX1Q9NZR4 365 aaPredicted RBP7.24□□□□□ -1.25
VPS50-212ENST00000476413 HDAC5Q9UQL6 1122 aa7.24□□□□□ -1.25
VPS50-212ENST00000476413 A0A087WV62 115 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 M0QYG6 137 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 NBNO60934 754 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 ANXA2P07355 339 aaKnown RBP7.23□□□□□ -1.25
VPS50-212ENST00000476413 GRPP07492 148 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 RABGGTBP53611 331 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 TNFAIP2Q03169 654 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 RAB32Q13637 225 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 LMBRD2Q68DH5 695 aaPredicted RBP7.23□□□□□ -1.25
VPS50-212ENST00000476413 SLC17A8Q8NDX2 589 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 DNERQ8NFT8 737 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 GDF15Q99988 308 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 XYLT2Q9H1B5 865 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 ZFR2Q9UPR6 939 aaKnown RBP7.23□□□□□ -1.25
VPS50-212ENST00000476413 CLCA2Q9UQC9 943 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 LRCH1Q9Y2L9 728 aa7.23□□□□□ -1.25
VPS50-212ENST00000476413 MBD3L4A6NDZ8 208 aaPredicted RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 MBD3L3A6NE82 208 aaPredicted RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 PYCARD-AS1I3L0S3 204 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 IPO13O94829 963 aaKnown RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 KIF20AO95235 890 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 CHEK2O96017 543 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 FCER1AP12319 257 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 HK1P19367 917 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 GCSHP23434 173 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 KLRC1P26715 233 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 TOB1P50616 345 aaPredicted RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 POU6F2P78424 691 aaPredicted RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 TRIM14Q14142 442 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 ARL13BQ3SXY8 428 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 DCAF17Q5H9S7 520 aaPredicted RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 DCAF12L1Q5VU92 463 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 UNC13DQ70J99 1090 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 HTR3DQ70Z44 454 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 MYLK4Q86YV6 388 aaPredicted RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 D2HGDHQ8N465 521 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 NKAPQ8N5F7 415 aaKnown RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 SLC15A4Q8N697 577 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 AOPEPQ8N6M6 819 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 MB21D1Q8N884 522 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 DDX17Q92841 729 aaKnown RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 IQCDQ96DY2 449 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 TMEM41AQ96HV5 264 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 SPATA5L1Q9BVQ7 753 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 TTLL2Q9BWV7 592 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 IMPG2Q9BZV3 1241 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 CHST8Q9H2A9 424 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 A1CFQ9NQ94 594 aaKnown RBP7.22□□□□□ -1.25
VPS50-212ENST00000476413 ETAA1Q9NY74 926 aa7.22□□□□□ -1.25
VPS50-212ENST00000476413 CCDC78A2IDD5 438 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 OTOL1A6NHN0 477 aaPredicted RBP7.21□□□□□ -1.26
VPS50-212ENST00000476413 PLA2G6O60733 806 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 MFAP3LO75121 409 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 PLATP00750 562 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 HALP42357 657 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 MAPK10P53779 464 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 BOP1Q14137 746 aaKnown RBP7.21□□□□□ -1.26
VPS50-212ENST00000476413 FAM102AQ5T9C2 384 aaPredicted RBP7.21□□□□□ -1.26
VPS50-212ENST00000476413 LCE3BQ5TA77 95 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 ANO1Q5XXA6 986 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 Q6ZSN1 163 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 LCNL1Q6ZST4 164 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 FAM46DQ8NEK8 389 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 NUP133Q8WUM0 1156 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 MIEF2Q96C03 454 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 LRIG1Q96JA1 1093 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 POGKQ9P215 609 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 XPR1Q9UBH6 696 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 PAXBP1Q9Y5B6 917 aa7.21□□□□□ -1.26
VPS50-212ENST00000476413 NPEPPSL1A6NEC2 478 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 DBX1A6NMT0 343 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 CLCA1A8K7I4 914 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 LEFTY2O00292 366 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 ADAMTS3O15072 1205 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 CKBP12277 381 aa7.2□□□□□ -1.26
VPS50-212ENST00000476413 BMP7P18075 431 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms