RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
HCFC1-204ENST00000461098 DUSP15Q9H1R2 295 aaPredicted RBP12.97□□□□□ -0.33
HCFC1-204ENST00000461098 VPS45Q9NRW7 570 aa12.97□□□□□ -0.33
HCFC1-204ENST00000461098 OBP2AQ9NY56 170 aa12.97□□□□□ -0.33
HCFC1-204ENST00000461098 TPCN1Q9ULQ1 816 aa12.97□□□□□ -0.33
HCFC1-204ENST00000461098 PCDHB8Q9UN66 801 aa12.97□□□□□ -0.33
HCFC1-204ENST00000461098 NUB1Q9Y5A7 615 aa12.97□□□□□ -0.33
HCFC1-204ENST00000461098 ITPR1Q14643 2758 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 ARHGEF35A5YM69 484 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 OTOL1A6NHN0 477 aaPredicted RBP12.96□□□□□ -0.33
HCFC1-204ENST00000461098 K7ERI5 159 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 AKAP3O75969 853 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 CPB1P15086 417 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 WEE1P30291 646 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 MCM4P33991 863 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 DUSP4Q13115 394 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 ACAP1Q15027 740 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 PLK5Q496M5 336 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 TMEM196Q5HYL7 178 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 RNF43Q68DV7 783 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 FSTL4Q6MZW2 842 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 TTC9BQ8N6N2 239 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 APPL2Q8NEU8 664 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 ACAP3Q96P50 834 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 TMEM209Q96SK2 561 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 TARS2Q9BW92 718 aaKnown RBP12.96□□□□□ -0.33
HCFC1-204ENST00000461098 PDRG1Q9NUG6 133 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 ORC3Q9UBD5 711 aaPredicted RBP12.96□□□□□ -0.33
HCFC1-204ENST00000461098 ATG2BQ96BY7 2078 aa12.96□□□□□ -0.33
HCFC1-204ENST00000461098 REC8O95072 547 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 CCDC192P0DO97 292 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 MCF2P10911 925 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
HCFC1-204ENST00000461098 NOVA1P51513 510 aaKnown RBP12.95□□□□□ -0.34
HCFC1-204ENST00000461098 GPR17Q13304 367 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 ZNF568Q3ZCX4 644 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 CENPPQ6IPU0 288 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 DNAJB7Q7Z6W7 309 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-204ENST00000461098 DAW1Q8N136 415 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 BPIFB1Q8TDL5 484 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 KIFAP3Q92845 792 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 GATA6Q92908 595 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 PSMG2Q969U7 264 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 ZBTB45Q96K62 511 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-204ENST00000461098 IFT74Q96LB3 600 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 TMEM134Q9H6X4 195 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 FBRSL1Q9HCM7 1045 aaKnown RBP12.95□□□□□ -0.34
HCFC1-204ENST00000461098 ARHGAP28Q9P2N2 729 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 TUBGCP4Q9UGJ1 667 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
HCFC1-204ENST00000461098 TIMM13Q9Y5L4 95 aaPredicted RBP12.95□□□□□ -0.34
HCFC1-204ENST00000461098 PHLPP2Q6ZVD8 1323 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 C4orf47A7E2U8 309 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 EPB41L2O43491 1005 aaKnown RBP12.94□□□□□ -0.34
HCFC1-204ENST00000461098 SOAT2O75908 522 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 NPTX2P47972 431 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 EPHB3P54753 998 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 YWHAHQ04917 246 aaPredicted RBP12.94□□□□□ -0.34
HCFC1-204ENST00000461098 ITPRIPL2Q3MIP1 535 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 SEZ6Q53EL9 994 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 GPR158Q5T848 1215 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 CENPQQ7L2Z9 268 aaPredicted RBP12.94□□□□□ -0.34
HCFC1-204ENST00000461098 APBB1IPQ7Z5R6 666 aaPredicted RBP12.94□□□□□ -0.34
HCFC1-204ENST00000461098 DIS3L2Q8IYB7 885 aaKnown RBP12.94□□□□□ -0.34
HCFC1-204ENST00000461098 CAMKK1Q8N5S9 505 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 ATAD1Q8NBU5 361 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 FAM200AQ8TCP9 573 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 FAM83CQ9BQN1 747 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 EDEM2Q9BV94 578 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 SMG9Q9H0W8 520 aaKnown RBP12.94□□□□□ -0.34
HCFC1-204ENST00000461098 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 IL21Q9HBE4 155 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 HPS4Q9NQG7 708 aa12.94□□□□□ -0.34
HCFC1-204ENST00000461098 CELSR3Q9NYQ7 3312 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 LNP1A1A4G5 178 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 BCLAF3A2AJT9 711 aaKnown RBP12.93□□□□□ -0.34
HCFC1-204ENST00000461098 MTMR11A4FU01 709 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 SRRM3A6NNA2 597 aaPredicted RBP12.93□□□□□ -0.34
HCFC1-204ENST00000461098 DPYSL4O14531 572 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 TRDMT1O14717 391 aaKnown RBP12.93□□□□□ -0.34
HCFC1-204ENST00000461098 DCLK1O15075 740 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 GABRR2P28476 465 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 LRPAP1P30533 357 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 MCM7P33993 719 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 PEX3P56589 373 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 CYP4F8P98187 520 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 ZNF252P-AS1Q0IIN9 211 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 FOXC1Q12948 553 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 PLD1Q13393 1074 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 ZBTB6Q15916 424 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 MPZL3Q6UWV2 235 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 HAUS6Q7Z4H7 955 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 RIN3Q8TB24 985 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 WASF1Q92558 559 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 SLC46A2Q9BY10 475 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 MRPL4Q9BYD3 311 aaKnown RBP12.93□□□□□ -0.34
HCFC1-204ENST00000461098 ADAM33Q9BZ11 813 aa12.93□□□□□ -0.34
HCFC1-204ENST00000461098 BHMT2Q9H2M3 363 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms