RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 GLIS3Q8NEA6 775 aa20.97■□□□□ 0.95
USP40-207ENST00000450940 SAAL1Q96ER3 474 aa20.97■□□□□ 0.95
USP40-207ENST00000450940 CBWD1Q9BRT8 395 aa20.97■□□□□ 0.95
USP40-207ENST00000450940 MFSD1Q9H3U5 465 aa20.97■□□□□ 0.95
USP40-207ENST00000450940 CEP72Q9P209 647 aa20.97■□□□□ 0.95
USP40-207ENST00000450940 FBXL21Q9UKT6 434 aa20.97■□□□□ 0.95
USP40-207ENST00000450940 DSEQ9UL01 958 aa20.97■□□□□ 0.95
USP40-207ENST00000450940 CACNA1HO95180 2353 aa20.97■□□□□ 0.95
USP40-207ENST00000450940 KRBA1A5PL33 1030 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 ZNF197O14709 1029 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 EIF3DO15371 548 aaKnown RBP eCLIP20.96■□□□□ 0.95
USP40-207ENST00000450940 CFHP08603 1231 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 TAF6P49848 677 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 EPHA5P54756 1037 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 ZNF507Q8TCN5 953 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 HPS3Q969F9 1004 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 CORO1BQ9BR76 489 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 FAM13BQ9NYF5 915 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 RBAKQ9NYW8 714 aaPredicted RBP20.96■□□□□ 0.95
USP40-207ENST00000450940 HSFX1Q9UBD0 423 aa20.96■□□□□ 0.95
USP40-207ENST00000450940 GALR2O43603 387 aaPredicted RBP20.95■□□□□ 0.94
USP40-207ENST00000450940 OR4Q2P0C623 313 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 AOC1P19801 751 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 ASIC1P78348 528 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 TWF1Q12792 350 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 CENPPQ6IPU0 288 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 UNC13DQ70J99 1090 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 ELMOD1Q8N336 334 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 LEMD2Q8NC56 503 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 CXorf38Q8TB03 319 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 GPR152Q8TDT2 470 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 ZNF512Q96ME7 567 aaPredicted RBP20.95■□□□□ 0.94
USP40-207ENST00000450940 PYM1Q9BRP8 204 aaKnown RBP20.95■□□□□ 0.94
USP40-207ENST00000450940 CRISPLD1Q9H336 500 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 ZDHHC9Q9Y397 364 aa20.95■□□□□ 0.94
USP40-207ENST00000450940 KPNA7A9QM74 516 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 CYB561D2O14569 222 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 CEBPBP17676 345 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 PNPLA4P41247 253 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 CCR2P41597 374 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 DUSP4Q13115 394 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 FAM26FQ5R3K3 315 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 IQCEQ6IPM2 695 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 ARMCX5Q6P1M9 558 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 GPD1LQ8N335 351 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 ST13P5Q8NFI4 369 aaPredicted RBP20.94■□□□□ 0.94
USP40-207ENST00000450940 OR10T2Q8NGX3 314 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 CACTINQ8WUQ7 758 aaKnown RBP20.94■□□□□ 0.94
USP40-207ENST00000450940 ING5Q8WYH8 240 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 MCRS1Q96EZ8 462 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 RTP3Q9BQQ7 232 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 IRF2BPLQ9H1B7 796 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 PCIF1Q9H4Z3 704 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 YIPF1Q9Y548 306 aa20.94■□□□□ 0.94
USP40-207ENST00000450940 PVALEFA0A1B0GWK0 134 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 MTMR11A4FU01 709 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 GOLGA8IPA6NC78 632 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 GOLGA8JA6NMD2 632 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 PI15O43692 258 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 MOSPD3O75425 235 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 ECI2O75521 394 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 GPC5P78333 572 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 TFAMQ00059 246 aaKnown RBP20.93■□□□□ 0.94
USP40-207ENST00000450940 PLD1Q13393 1074 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 SV2CQ496J9 727 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 CYP4A22Q5TCH4 519 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 PHLDB3Q6NSJ2 640 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 PDZD4Q76G19 769 aaPredicted RBP20.93■□□□□ 0.94
USP40-207ENST00000450940 C1orf127Q8N9H9 656 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 FLCNQ8NFG4 579 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 TCEAL4Q96EI5 215 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 ZNF560Q96MR9 790 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 PGLYRP2Q96PD5 576 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 TMEM209Q96SK2 561 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 LRRC3Q9BY71 257 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 ZCWPW1Q9H0M4 648 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 PDE11AQ9HCR9 933 aa20.93■□□□□ 0.94
USP40-207ENST00000450940 NRG2O14511 850 aaPredicted RBP20.92■□□□□ 0.94
USP40-207ENST00000450940 TGFB1I1O43294 461 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 SNRPFP62306 86 aaKnown RBP20.92■□□□□ 0.94
USP40-207ENST00000450940 WSCD1Q658N2 575 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 METTL23Q86XA0 190 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 HS6ST3Q8IZP7 471 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 LRRC52Q8N7C0 313 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 ATAD1Q8NBU5 361 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 DNAJC25Q9H1X3 360 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 KIAA1586Q9HCI6 787 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 ITGA11Q9UKX5 1188 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 AGAP1Q9UPQ3 857 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 ASB3Q9Y575 518 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 UBE4BO95155 1302 aa20.92■□□□□ 0.94
USP40-207ENST00000450940 ZNF233A6NK53 670 aa20.91■□□□□ 0.94
USP40-207ENST00000450940 ITGB3P05106 788 aa20.91■□□□□ 0.94
USP40-207ENST00000450940 SLFN14P0C7P3 912 aa20.91■□□□□ 0.94
USP40-207ENST00000450940 FCARP24071 287 aa20.91■□□□□ 0.94
USP40-207ENST00000450940 CASP1P29466 404 aa20.91■□□□□ 0.94
USP40-207ENST00000450940 SMARCB1Q12824 385 aa20.91■□□□□ 0.94
USP40-207ENST00000450940 SURF1Q15526 300 aa20.91■□□□□ 0.94
USP40-207ENST00000450940 BMT2Q1RMZ1 405 aa20.91■□□□□ 0.94
USP40-207ENST00000450940 THEM5Q8N1Q8 247 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms