RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HIST2H2ACQ16777 129 aaPredicted RBP19.32■□□□□ 0.68
SHANK3-202ENST00000414786 HIST2H2AA3Q6FI13 130 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 GATAD2AQ86YP4 633 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 SYTL1Q8IYJ3 562 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 OSBPL6Q9BZF3 934 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 F5H6K3 240 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 PODXLO00592 558 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 DYRK3O43781 588 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 KLRC3Q07444 240 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 CCDC15Q0P6D6 951 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 PKD2L2Q9NZM6 624 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 TRPC4Q9UBN4 977 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 CLK1P49759 484 aaKnown RBP19.32■□□□□ 0.68
SHANK3-202ENST00000414786 MIR1-1HGQ9H1L0 117 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 SYNGAP1Q96PV0 1343 aa19.32■□□□□ 0.68
SHANK3-202ENST00000414786 BLMP54132 1417 aaPredicted RBP19.32■□□□□ 0.68
SHANK3-202ENST00000414786 ASB14A6NK59 587 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 PCP11498 1178 aaKnown RBP19.31■□□□□ 0.68
SHANK3-202ENST00000414786 SCARF1Q14162 830 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 SNX17Q15036 470 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 BBS7Q8IWZ6 715 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 ZNF512BQ96KM6 892 aaPredicted RBP19.31■□□□□ 0.68
SHANK3-202ENST00000414786 FAM107AO95990 144 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 INPP5AQ14642 412 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 TDRD10Q5VZ19 366 aaKnown RBP19.31■□□□□ 0.68
SHANK3-202ENST00000414786 KIAA1586Q9HCI6 787 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 TBC1D22BQ9NU19 505 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 ADAM21Q9UKJ8 722 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 PALLDQ8WX93 1383 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 P4HBP07237 508 aaKnown RBP19.31■□□□□ 0.68
SHANK3-202ENST00000414786 GGCXP38435 758 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 CCR4P51679 360 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 PI4K2AQ9BTU6 479 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 EPC1Q9H2F5 836 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 EHD2Q9NZN4 543 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 PDGFRAP16234 1089 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 POU4F1Q01851 419 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 AHI1Q8N157 1196 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 DBR1Q9UK59 544 aaKnown RBP19.31■□□□□ 0.68
SHANK3-202ENST00000414786 MLH3Q9UHC1 1453 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 TBX3O15119 743 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 ATMINO43313 823 aaPredicted RBP19.31■□□□□ 0.68
SHANK3-202ENST00000414786 CYP19A1P11511 503 aaPredicted RBP19.31■□□□□ 0.68
SHANK3-202ENST00000414786 STIP1P31948 543 aaKnown RBP19.31■□□□□ 0.68
SHANK3-202ENST00000414786 PPP1R18Q6NYC8 613 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 SRPRBQ9Y5M8 271 aaKnown RBP19.31■□□□□ 0.68
SHANK3-202ENST00000414786 KRT76Q01546 638 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 KCTD10Q9H3F6 313 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 TBX22Q9Y458 520 aa19.31■□□□□ 0.68
SHANK3-202ENST00000414786 CKMP06732 381 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 TRIM25Q14258 630 aaKnown RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 GSTA3Q16772 222 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 C4orf33Q8N1A6 199 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 ZC3H15Q8WU90 426 aaKnown RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 THUMPD3Q9BV44 507 aaKnown RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 IL1RAPL1Q9NZN1 696 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 MOXD2PA6NHM9 499 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 TEX28O15482 410 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 TSPAN3O60637 253 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 NCKAP1LP55160 1127 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 RUNX1T1Q06455 604 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 P3H1Q32P28 736 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 EPC2Q52LR7 807 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 EFCAB12Q6NXP0 572 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 TADA1Q96BN2 335 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 THAP11Q96EK4 314 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 SNF8Q96H20 258 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 ETNK1Q9HBU6 452 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 SPON1Q9HCB6 807 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 RRN3P2A6NIE6 340 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 PSMD12O00232 456 aaPredicted RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 CLK2P49760 499 aaKnown RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 KNOP1Q1ED39 458 aaKnown RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 POM121L1PQ3SYA9 428 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 DDI1Q8WTU0 396 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 DDX56Q9NY93 547 aaKnown RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 MYL2P10916 166 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 PLA2G4AP47712 749 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 RABGAP1LQ5R372 815 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 RARS2Q5T160 578 aaKnown RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 SLC25A24Q6NUK1 477 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 TMEM117Q9H0C3 514 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 MRPL40Q9NQ50 206 aaKnown RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 BAATQ14032 418 aaPredicted RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 CYP4X1Q8N118 509 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 CCDC85CA6NKD9 419 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
SHANK3-202ENST00000414786 HSMCR30P0CW71 290 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 FAXCQ5TGI0 409 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 C11orf88Q6PI97 169 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 CCDC149Q6ZUS6 474 aa19.3■□□□□ 0.68
SHANK3-202ENST00000414786 RNASEH1O60930 286 aaKnown RBP19.29■□□□□ 0.68
SHANK3-202ENST00000414786 PGM1P36871 562 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 MCAMP43121 646 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 LRRC63Q05C16 580 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 ROGDIQ9GZN7 287 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
SHANK3-202ENST00000414786 LONRF1Q17RB8 773 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 CNBD2Q96M20 576 aa19.29■□□□□ 0.68
SHANK3-202ENST00000414786 LARGE1O95461 756 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms