RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 PRR23D2P0DMB1 279 aaPredicted RBP10.02□□□□□ -0.81
SNX1-202ENST00000380285 YWHABP31946 246 aaKnown RBP10.02□□□□□ -0.81
SNX1-202ENST00000380285 RAD51Q06609 339 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 ZNF394Q53GI3 561 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 ANKMY2Q8IV38 441 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 TBC1D19Q8N5T2 526 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 SH3GL2Q99962 352 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 SOX13Q9UN79 622 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 ALKQ9UM73 1620 aa10.02□□□□□ -0.81
SNX1-202ENST00000380285 FOXN1O15353 648 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 SKOR1P84550 965 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 PURAQ00577 322 aaKnown RBP10.01□□□□□ -0.81
SNX1-202ENST00000380285 QRICH1Q2TAL8 776 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 TBC1D10BQ4KMP7 808 aaPredicted RBP10.01□□□□□ -0.81
SNX1-202ENST00000380285 C1orf228Q6PIY5 440 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 RNF217Q8TC41 542 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 PTPRN2Q92932 1015 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 C20orf96Q9NUD7 363 aaPredicted RBP10.01□□□□□ -0.81
SNX1-202ENST00000380285 ALG6Q9Y672 507 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 ADRA2BP18089 450 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 RAB14P61106 215 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 TTLL4Q14679 1199 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 SCUBE1Q8IWY4 988 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 ILKAPQ9H0C8 392 aaPredicted RBP10.01□□□□□ -0.81
SNX1-202ENST00000380285 ARHGEF38Q9NXL2 777 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 SESN1Q9Y6P5 492 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 GLRA3O75311 464 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 TRIM49P0CI25 452 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 TRIM49CP0CI26 452 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 CATSPER2Q96P56 530 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 TMEM245Q9H330 911 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 TLR2O60603 784 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 PDE5AO76074 875 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 GTF2H1P32780 548 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 SUSD4Q5VX71 490 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 XRRA1Q6P2D8 792 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 PHF21AQ96BD5 680 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 FOPNLQ96NB1 174 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 EFCAB1Q9HAE3 211 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 FAM95CA0A1B0GW59 222 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 SNTNA6NMZ2 147 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 PPP1R3GB7ZBB8 358 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 RALBP11234 206 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 KCNK10P57789 538 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 EPHA10Q5JZY3 1008 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 KLHDC7AQ5VTJ3 777 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 ANKS3Q6ZW76 656 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 RAB21Q9UL25 225 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 PHTF1Q9UMS5 762 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 LRCH1Q9Y2L9 728 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 CLASP2O75122 1294 aaKnown RBP10.01□□□□□ -0.81
SNX1-202ENST00000380285 PDAP1Q13442 181 aaKnown RBP10.01□□□□□ -0.81
SNX1-202ENST00000380285 ZNF235Q14590 738 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 MTFR1Q15390 333 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 NLRP9Q7RTR0 991 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 SRBD1Q8N5C6 995 aaKnown RBP10.01□□□□□ -0.81
SNX1-202ENST00000380285 VPS37AQ8NEZ2 397 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 OVOS2A0A0G2JMS6 1433 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 USP17L10C9JJH3 530 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 MAFGO15525 162 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 COMTP21964 271 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 PTPN4P29074 926 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 NNMTP40261 264 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 STOX1Q6ZVD7 989 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 SLC13A5Q86YT5 568 aaPredicted RBP10.01□□□□□ -0.81
SNX1-202ENST00000380285 MAGED4Q96JG8 741 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 CNDP1Q96KN2 507 aa10.01□□□□□ -0.81
SNX1-202ENST00000380285 NPHP4O75161 1426 aaPredicted RBP10□□□□□ -0.81
SNX1-202ENST00000380285 TDP2O95551 362 aa10□□□□□ -0.81
SNX1-202ENST00000380285 CRKP46108 304 aa10□□□□□ -0.81
SNX1-202ENST00000380285 SPATA18Q8TC71 538 aa10□□□□□ -0.81
SNX1-202ENST00000380285 URGCPQ8TCY9 931 aa10□□□□□ -0.81
SNX1-202ENST00000380285 ATXN2LQ8WWM7 1075 aaKnown RBP10□□□□□ -0.81
SNX1-202ENST00000380285 KCNB2Q92953 911 aa10□□□□□ -0.81
SNX1-202ENST00000380285 ZSWIM1Q9BR11 485 aa10□□□□□ -0.81
SNX1-202ENST00000380285 TASP1Q9H6P5 420 aa10□□□□□ -0.81
SNX1-202ENST00000380285 PCMTD2Q9NV79 361 aa10□□□□□ -0.81
SNX1-202ENST00000380285 GABBR1Q9UBS5 961 aa10□□□□□ -0.81
SNX1-202ENST00000380285 FARP1Q9Y4F1 1045 aaPredicted RBP10□□□□□ -0.81
SNX1-202ENST00000380285 ADGRB3O60242 1522 aa10□□□□□ -0.81
SNX1-202ENST00000380285 ZC3H11AO75152 810 aaKnown RBP eCLIP10□□□□□ -0.81
SNX1-202ENST00000380285 RALAP11233 206 aa10□□□□□ -0.81
SNX1-202ENST00000380285 RBP5P82980 135 aa10□□□□□ -0.81
SNX1-202ENST00000380285 TP53BP2Q13625 1128 aa10□□□□□ -0.81
SNX1-202ENST00000380285 SNRNP35Q16560 246 aaKnown RBP10□□□□□ -0.81
SNX1-202ENST00000380285 YTHDF3Q7Z739 585 aaKnown RBP10□□□□□ -0.81
SNX1-202ENST00000380285 LRRC6Q86X45 466 aa10□□□□□ -0.81
SNX1-202ENST00000380285 MFN1Q8IWA4 741 aa10□□□□□ -0.81
SNX1-202ENST00000380285 C4orf33Q8N1A6 199 aa10□□□□□ -0.81
SNX1-202ENST00000380285 GZMAP12544 262 aa10□□□□□ -0.81
SNX1-202ENST00000380285 GRK2P25098 689 aa10□□□□□ -0.81
SNX1-202ENST00000380285 C12orf60Q5U649 245 aa10□□□□□ -0.81
SNX1-202ENST00000380285 RDM1Q8NG50 284 aa10□□□□□ -0.81
SNX1-202ENST00000380285 ZNF335Q9H4Z2 1342 aaPredicted RBP10□□□□□ -0.81
SNX1-202ENST00000380285 C5orf58C9J3I9 102 aa10□□□□□ -0.81
SNX1-202ENST00000380285 USP1O94782 785 aa10□□□□□ -0.81
SNX1-202ENST00000380285 SEC24DO94855 1032 aaPredicted RBP10□□□□□ -0.81
SNX1-202ENST00000380285 SNUPNO95149 360 aaKnown RBP10□□□□□ -0.81
SNX1-202ENST00000380285 FAM83EQ2M2I3 478 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms