RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RAPGEF5Q92565 580 aa8.82□□□□□ -1
VPS36-201ENST00000378060 TMEM117Q9H0C3 514 aa8.82□□□□□ -1
VPS36-201ENST00000378060 ZNF541Q9H0D2 1346 aa8.82□□□□□ -1
VPS36-201ENST00000378060 ING2Q9H160 280 aa8.82□□□□□ -1
VPS36-201ENST00000378060 DHX35Q9H5Z1 703 aaKnown RBP8.82□□□□□ -1
VPS36-201ENST00000378060 ACAD9Q9H845 621 aa8.82□□□□□ -1
VPS36-201ENST00000378060 NPHS2Q9NP85 383 aa8.82□□□□□ -1
VPS36-201ENST00000378060 KRT82Q9NSB4 513 aa8.82□□□□□ -1
VPS36-201ENST00000378060 ARHGAP20Q9P2F6 1191 aa8.82□□□□□ -1
VPS36-201ENST00000378060 MAD2L2Q9UI95 211 aa8.82□□□□□ -1
VPS36-201ENST00000378060 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.82□□□□□ -1
VPS36-201ENST00000378060 TFR2Q9UP52 801 aa8.82□□□□□ -1
VPS36-201ENST00000378060 TRAF3IP3Q9Y228 551 aa8.82□□□□□ -1
VPS36-201ENST00000378060 GTPBP10A4D1E9 387 aaKnown RBP8.81□□□□□ -1
VPS36-201ENST00000378060 KCNJ1P48048 391 aa8.81□□□□□ -1
VPS36-201ENST00000378060 EVX2Q03828 476 aa8.81□□□□□ -1
VPS36-201ENST00000378060 ANKMY2Q8IV38 441 aa8.81□□□□□ -1
VPS36-201ENST00000378060 RYBPQ8N488 228 aaPredicted RBP8.81□□□□□ -1
VPS36-201ENST00000378060 MTBPQ96DY7 904 aa8.81□□□□□ -1
VPS36-201ENST00000378060 CYP4F11Q9HBI6 524 aa8.81□□□□□ -1
VPS36-201ENST00000378060 ADA2Q9NZK5 511 aa8.81□□□□□ -1
VPS36-201ENST00000378060 PAK5Q9P286 719 aa8.81□□□□□ -1
VPS36-201ENST00000378060 ZC3H7BQ9UGR2 993 aaKnown RBP8.81□□□□□ -1
VPS36-201ENST00000378060 GGT7Q9UJ14 662 aa8.81□□□□□ -1
VPS36-201ENST00000378060 SMIM22K7EJ46 135 aa8.81□□□□□ -1
VPS36-201ENST00000378060 O00370 1275 aa8.81□□□□□ -1
VPS36-201ENST00000378060 IGF2BP3O00425 579 aaKnown RBP eCLIP8.81□□□□□ -1
VPS36-201ENST00000378060 CES2O00748 559 aa8.81□□□□□ -1
VPS36-201ENST00000378060 AARSP49588 968 aaKnown RBP eCLIP8.81□□□□□ -1
VPS36-201ENST00000378060 ARHGDIAP52565 204 aa8.81□□□□□ -1
VPS36-201ENST00000378060 TRADDQ15628 312 aa8.81□□□□□ -1
VPS36-201ENST00000378060 SGSM1Q2NKQ1 1148 aa8.81□□□□□ -1
VPS36-201ENST00000378060 TEX2Q8IWB9 1127 aa8.81□□□□□ -1
VPS36-201ENST00000378060 LRRC34Q8IZ02 419 aa8.81□□□□□ -1
VPS36-201ENST00000378060 C4orf33Q8N1A6 199 aa8.81□□□□□ -1
VPS36-201ENST00000378060 EIF1ADQ8N9N8 165 aaKnown RBP8.81□□□□□ -1
VPS36-201ENST00000378060 RBBP8NLQ8NC74 664 aaPredicted RBP8.81□□□□□ -1
VPS36-201ENST00000378060 LPAR1Q92633 364 aa8.81□□□□□ -1
VPS36-201ENST00000378060 FSD1LQ9BXM9 530 aa8.81□□□□□ -1
VPS36-201ENST00000378060 KDM4CQ9H3R0 1056 aa8.81□□□□□ -1
VPS36-201ENST00000378060 VCPKMTQ9H867 229 aa8.81□□□□□ -1
VPS36-201ENST00000378060 C17orf75Q9HAS0 396 aa8.81□□□□□ -1
VPS36-201ENST00000378060 ANKEF1Q9NU02 776 aa8.81□□□□□ -1
VPS36-201ENST00000378060 SALL1Q9NSC2 1324 aa8.81□□□□□ -1
VPS36-201ENST00000378060 CCDC195A0A1B0GUA6 201 aa8.81□□□□□ -1
VPS36-201ENST00000378060 MAFGO15525 162 aa8.81□□□□□ -1
VPS36-201ENST00000378060 PON1P27169 355 aa8.81□□□□□ -1
VPS36-201ENST00000378060 IREB2P48200 963 aaKnown RBP8.81□□□□□ -1
VPS36-201ENST00000378060 INPP1P49441 399 aa8.81□□□□□ -1
VPS36-201ENST00000378060 MEI1Q5TIA1 1274 aa8.81□□□□□ -1
VPS36-201ENST00000378060 DAB2IPQ5VWQ8 1189 aa8.81□□□□□ -1
VPS36-201ENST00000378060 C4orf50Q6ZRC1 276 aa8.81□□□□□ -1
VPS36-201ENST00000378060 ABI1Q8IZP0 508 aa8.81□□□□□ -1
VPS36-201ENST00000378060 SNX5Q9Y5X3 404 aa8.81□□□□□ -1
VPS36-201ENST00000378060 MYH2Q9UKX2 1941 aa8.81□□□□□ -1
VPS36-201ENST00000378060 ACADSP16219 412 aa8.81□□□□□ -1
VPS36-201ENST00000378060 YWHAHQ04917 246 aaPredicted RBP8.81□□□□□ -1
VPS36-201ENST00000378060 KDSRQ06136 332 aa8.81□□□□□ -1
VPS36-201ENST00000378060 SLC12A1Q13621 1099 aa8.81□□□□□ -1
VPS36-201ENST00000378060 NCOA4Q13772 614 aa8.81□□□□□ -1
VPS36-201ENST00000378060 CRYMQ14894 314 aa8.81□□□□□ -1
VPS36-201ENST00000378060 UGP2Q16851 508 aa8.81□□□□□ -1
VPS36-201ENST00000378060 RWDD4Q6NW29 188 aaKnown RBP8.81□□□□□ -1
VPS36-201ENST00000378060 C3orf62Q6ZUJ4 267 aa8.81□□□□□ -1
VPS36-201ENST00000378060 CATSPER3Q86XQ3 398 aa8.81□□□□□ -1
VPS36-201ENST00000378060 CPA5Q8WXQ8 436 aa8.81□□□□□ -1
VPS36-201ENST00000378060 CMTM5Q96DZ9 223 aa8.81□□□□□ -1
VPS36-201ENST00000378060 NSL1Q96IY1 281 aa8.81□□□□□ -1
VPS36-201ENST00000378060 TRIM62Q9BVG3 475 aa8.81□□□□□ -1
VPS36-201ENST00000378060 RSAD1Q9HA92 442 aa8.81□□□□□ -1
VPS36-201ENST00000378060 JPH1Q9HDC5 661 aaPredicted RBP8.81□□□□□ -1
VPS36-201ENST00000378060 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
VPS36-201ENST00000378060 AGPAT3Q9NRZ7 376 aa8.81□□□□□ -1
VPS36-201ENST00000378060 FAM217BQ9NTX9 383 aaPredicted RBP8.81□□□□□ -1
VPS36-201ENST00000378060 EHD2Q9NZN4 543 aa8.81□□□□□ -1
VPS36-201ENST00000378060 RNF181Q9P0P0 153 aa8.81□□□□□ -1
VPS36-201ENST00000378060 WHRNQ9P202 907 aa8.81□□□□□ -1
VPS36-201ENST00000378060 PRR12Q9ULL5 1215 aa8.81□□□□□ -1
VPS36-201ENST00000378060 EGFRP00533 1210 aa8.8□□□□□ -1
VPS36-201ENST00000378060 CUL3Q13618 768 aa8.8□□□□□ -1
VPS36-201ENST00000378060 MYBPC2Q14324 1141 aa8.8□□□□□ -1
VPS36-201ENST00000378060 ZC2HC1CQ53FD0 456 aaPredicted RBP8.8□□□□□ -1
VPS36-201ENST00000378060 TMCO4Q5TGY1 634 aa8.8□□□□□ -1
VPS36-201ENST00000378060 GRAMD4Q6IC98 578 aa8.8□□□□□ -1
VPS36-201ENST00000378060 XRRA1Q6P2D8 792 aa8.8□□□□□ -1
VPS36-201ENST00000378060 KCNV1Q6PIU1 500 aa8.8□□□□□ -1
VPS36-201ENST00000378060 PID1Q7Z2X4 250 aa8.8□□□□□ -1
VPS36-201ENST00000378060 FRMD8P1Q9BZ68 369 aaPredicted RBP8.8□□□□□ -1
VPS36-201ENST00000378060 SEMA6BQ9H3T3 888 aa8.8□□□□□ -1
VPS36-201ENST00000378060 PNMA3Q9UL41 463 aa8.8□□□□□ -1
VPS36-201ENST00000378060 SUFUQ9UMX1 484 aa8.8□□□□□ -1
VPS36-201ENST00000378060 CEP350Q5VT06 3117 aa8.8□□□□□ -1
VPS36-201ENST00000378060 TIAM2Q8IVF5 1701 aa8.8□□□□□ -1
VPS36-201ENST00000378060 LOC102724159A0A0B4J2E5 919 aa8.8□□□□□ -1
VPS36-201ENST00000378060 GOLGA8RI6L899 631 aa8.8□□□□□ -1
VPS36-201ENST00000378060 MAP2K7O14733 419 aa8.8□□□□□ -1
VPS36-201ENST00000378060 ENO1P06733 434 aaKnown RBP8.8□□□□□ -1
VPS36-201ENST00000378060 APRTP07741 180 aa8.8□□□□□ -1
VPS36-201ENST00000378060 IL10P22301 178 aa8.8□□□□□ -1
VPS36-201ENST00000378060 CXCL9Q07325 125 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms