RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 A0A0G2JND7 137 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 EIF3DO15371 548 aaKnown RBP eCLIP12.34□□□□□ -0.433e-8■□□□□ 10.2
SMARCA1-201ENST00000371121 MSH4O15457 936 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 GYG2O15488 501 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 ATF2P15336 505 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 CA4P22748 312 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 CPOXP36551 454 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 DLG1Q12959 904 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 SYDE2Q5VT97 1194 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 PPP1R18Q6NYC8 613 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 CAPN12Q6ZSI9 719 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 HS2ST1Q7LGA3 356 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 BANPQ8N9N5 519 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 TCP10LQ8TDR4 215 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 HSD17B14Q9BPX1 270 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 C20orf27Q9GZN8 174 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
SMARCA1-201ENST00000371121 A0A0J9YVX5 310 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 SPOPO43791 374 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 GZMAP12544 262 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 BMP3P12645 472 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 RPL13P26373 211 aaKnown RBP12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 PCSK6P29122 969 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 TAS2R40P59535 323 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 ACTR3P61158 418 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 MTMR2Q13614 643 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 KRT72Q14CN4 511 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 SLC25A41Q8N5S1 370 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 ZNF395Q9H8N7 513 aaPredicted RBP12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 ZDHHC7Q9NXF8 308 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 ANKFY1Q9P2R3 1169 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 TMCO1Q9UM00 188 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 NFASCO94856 1347 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 DENND3A2RUS2 1198 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 MAP3K7O43318 606 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 CREB3O43889 395 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 ITGA2BP08514 1039 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 GTF2H1P32780 548 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 ARL4CP56559 192 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 CDK16Q00536 496 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 CCDC6Q16204 474 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 PRR16Q569H4 304 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 UGT2A3Q6UWM9 527 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 LARGE2Q8N3Y3 721 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 MORC4Q8TE76 937 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 DTNBP1Q96EV8 351 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 GBP5Q96PP8 586 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 ANO3Q9BYT9 981 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 USP29Q9HBJ7 922 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 TMEM165Q9HC07 324 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 DNM3Q9UQ16 869 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 MYH9P35579 1960 aaKnown RBP12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 FAM237BA0A1B0GVD1 139 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 MAGEB3O15480 346 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 ITGBL1O95965 494 aaPredicted RBP12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 CFHP08603 1231 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 DSG1Q02413 1049 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 FAM91A1Q658Y4 838 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 STKLD1Q8NE28 680 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 MRRFQ96E11 262 aaKnown RBP12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 DYDC2Q96IM9 177 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 KLF6Q99612 283 aaPredicted RBP12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 ZNF232Q9UNY5 417 aa12.33□□□□□ -0.44
SMARCA1-201ENST00000371121 HAUS5O94927 633 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 BTDP43251 543 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 PDE1BQ01064 536 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 Q4G0T1 1027 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 ASPRV1Q53RT3 343 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 PAOXQ6QHF9 649 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 ATG14Q6ZNE5 492 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 SPATA24Q86W54 205 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 SCYL3Q8IZE3 742 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 DHX38Q92620 1227 aaKnown RBP12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 EIF2AK1Q9BQI3 630 aaKnown RBP12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 SAYSD1Q9NPB0 183 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 CLIC5Q9NZA1 410 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 GTF3C4Q9UKN8 822 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 SMG5Q9UPR3 1016 aaKnown RBP12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 GOLGA8RI6L899 631 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 ZBTB5O15062 677 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 LDHBP07195 334 aaKnown RBP12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 VAV1P15498 845 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 ALDH1B1P30837 517 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 EFHC2Q5JST6 749 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 FAM182AQ5T1J6 154 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 RASIP1Q5U651 963 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 SYDE1Q6ZW31 735 aaPredicted RBP12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 LCA5Q86VQ0 697 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 OGFOD1Q8N543 542 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 ZNF526Q8TF50 670 aaPredicted RBP12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 DCAKDQ8WVC6 231 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 FAM84AQ96KN4 292 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 RGPD3A6NKT7 1758 aaPredicted RBP12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 RGPD4Q7Z3J3 1758 aa12.32□□□□□ -0.44
SMARCA1-201ENST00000371121 A0A088AWK7 358 aa12.31□□□□□ -0.44
SMARCA1-201ENST00000371121 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms