RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TLR2O60603 784 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 APRTP07741 180 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 OSBPP22059 807 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 CLMNQ96JQ2 1002 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 DPPA5A6NC42 116 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 SPAG6O75602 509 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 LDHAP00338 332 aaKnown RBP16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 CDH6P55285 790 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 DLGAP5Q15398 846 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 CCNG2Q16589 344 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 ZNF572Q7Z3I7 529 aaPredicted RBP16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 GPD1LQ8N335 351 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 TTC8Q8TAM2 541 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 KLHL4Q9C0H6 718 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 STRNO43815 780 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 MORF4L2Q15014 288 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 ING2Q9H160 280 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 PCYOX1Q9UHG3 505 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 TAGLN3Q9UI15 199 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 C5orf60A6NFR6 353 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 CST8O60676 142 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 KRT36O76013 467 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 PAEPP09466 180 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 BGNP21810 368 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 PARP6Q2NL67 630 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 TMEM119Q4V9L6 283 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 C1orf228Q6PIY5 440 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 CCNYL1Q8N7R7 359 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 NWD1Q149M9 1564 aa16.76■□□□□ 0.27
CLSTN1-201ENST00000361311 ABLIM1O14639 778 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 OSTNP61366 133 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 IYDQ6PHW0 289 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 RNF217Q8TC41 542 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 TNFRSF25Q93038 417 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 ARMCX1Q9P291 453 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 DLG5Q8TDM6 1919 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 TTC36A6NLP5 189 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 BBOX1O75936 387 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 WFS1O76024 890 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 SEC24DO94855 1032 aaPredicted RBP16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 RBP3P10745 1247 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 AQP5P55064 265 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 EFHC1Q5JVL4 640 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 KLC3Q6P597 504 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 SEPT12Q8IYM1 358 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 TCP10LQ8TDR4 215 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 MCEEQ96PE7 176 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 GORASP1Q9BQQ3 440 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 PIK3CDO00329 1044 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 PYGBP11216 843 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 STMN1P16949 149 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 KPNA2P52292 529 aaKnown RBP16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 TAP1Q03518 808 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 TTC39BQ5VTQ0 682 aaPredicted RBP16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 FITM2Q8N6M3 262 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 MAB21L3Q8N8X9 362 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 DDI1Q8WTU0 396 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 FAM210AQ96ND0 272 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 CATSPER2Q96P56 530 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 SLCO1B3Q9NPD5 702 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 NRBP2Q9NSY0 501 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 KCND2Q9NZV8 630 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 PCDHA3Q9Y5H8 950 aa16.75■□□□□ 0.27
CLSTN1-201ENST00000361311 TM9SF1O15321 606 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 CYTH3O43739 400 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 UPP2O95045 317 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 CYP11B1P15538 503 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 ZFXP17010 805 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 MTMR1Q13613 665 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 CWF19L1Q69YN2 538 aaKnown RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 IRF2BP2Q7Z5L9 587 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 RNF169Q8NCN4 708 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 FAM13CQ8NE31 585 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 FBXO36Q8NEA4 188 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 FAM81AQ8TBF8 368 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 PPP1R36Q96LQ0 422 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 DCLK3Q9C098 648 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 CAAP1Q9H8G2 361 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 PREX1Q8TCU6 1659 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 NEMP1O14524 444 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 FUT2Q10981 343 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 TLCD1Q96CP7 247 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 HEXIM2Q96MH2 286 aaKnown RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 POP1Q99575 1024 aaKnown RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 IL17RBQ9NRM6 502 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 DDX18Q9NVP1 670 aaKnown RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 F5H423 210 aaPredicted RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 GNGT2O14610 69 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 RRM1P23921 792 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 ADRA1DP25100 572 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 CASP2P42575 452 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 SF3B3Q15393 1217 aaKnown RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 DDX50Q9BQ39 737 aaKnown RBP16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 PI4K2AQ9BTU6 479 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 SLC38A10Q9HBR0 1119 aa16.74■□□□□ 0.27
CLSTN1-201ENST00000361311 TMEM8AQ9HCN3 771 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms