RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 STK25O00506 426 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 KIAA0391O15091 583 aaKnown RBP19.19■□□□□ 0.66
HDDC3-201ENST00000330334 CEBPBP17676 345 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 NBL1P41271 181 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 TAF6P49848 677 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 CASP5P51878 434 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 ARMCX5Q6P1M9 558 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 POTEHQ6S545 545 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 HSCBQ8IWL3 235 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 PDILTQ8N807 584 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 IQUBQ8NA54 791 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 ST13P5Q8NFI4 369 aaPredicted RBP19.19■□□□□ 0.66
HDDC3-201ENST00000330334 BORCS6Q96GS4 357 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 GPR88Q9GZN0 384 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 SIT1Q9Y3P8 196 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 YIPF1Q9Y548 306 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 ASB3Q9Y575 518 aa19.19■□□□□ 0.66
HDDC3-201ENST00000330334 MYO15AQ9UKN7 3530 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 ZSCAN22P10073 491 aaPredicted RBP19.18■□□□□ 0.66
HDDC3-201ENST00000330334 RFX1P22670 979 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 PNPLA4P41247 253 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 CCR2P41597 374 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 SMARCB1Q12824 385 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 DUSP4Q13115 394 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 SLC44A4Q53GD3 710 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 STXBP4Q6ZWJ1 553 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 BRSK2Q8IWQ3 736 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 EFCAB13Q8IY85 973 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 SYCP3Q8IZU3 236 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 KCNG4Q8TDN1 519 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 TCEAL4Q96EI5 215 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 KXD1Q9BQD3 176 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 FAM213AQ9BRX8 229 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 TRPV4Q9HBA0 871 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 ASAH2Q9NR71 780 aa19.18■□□□□ 0.66
HDDC3-201ENST00000330334 VPS13AQ96RL7 3174 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 MTMR11A4FU01 709 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 CYB561D2O14569 222 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 EXTL3O43909 919 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 MOSPD3O75425 235 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 OR4Q2P0C623 313 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 ALDH1A3P47895 512 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 EPHB3P54753 998 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 TANGO2Q6ICL3 276 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 SHC4Q6S5L8 630 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 METTL23Q86XA0 190 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 CACTINQ8WUQ7 758 aaKnown RBP19.17■□□□□ 0.66
HDDC3-201ENST00000330334 ASB16Q96NS5 453 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 PGLYRP2Q96PD5 576 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 LRRC3Q9BY71 257 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 OSBPL6Q9BZF3 934 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 TRIM9Q9C026 710 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 ZCWPW1Q9H0M4 648 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 CRISPLD1Q9H336 500 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 MAGEF1Q9HAY2 307 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 ZFP14Q9HCL3 533 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 FAM86C1Q9NVL1 165 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 DLGAP2Q9P1A6 1054 aa19.17■□□□□ 0.66
HDDC3-201ENST00000330334 KANSL1LA0AUZ9 987 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 KPNA7A9QM74 516 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 HSP90AA1P07900 732 aaKnown RBP19.16■□□□□ 0.66
HDDC3-201ENST00000330334 FCARP24071 287 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 TUFMP49411 452 aaKnown RBP19.16■□□□□ 0.66
HDDC3-201ENST00000330334 SNW1Q13573 536 aaKnown RBP19.16■□□□□ 0.66
HDDC3-201ENST00000330334 ANGPT1Q15389 498 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 MLF2Q15773 248 aaPredicted RBP19.16■□□□□ 0.66
HDDC3-201ENST00000330334 SV2CQ496J9 727 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 FAM78AQ5JUQ0 283 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 HS6ST3Q8IZP7 471 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 THEM5Q8N1Q8 247 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 ATAD1Q8NBU5 361 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 PJA1Q8NG27 643 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 OR10T2Q8NGX3 314 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 C2orf15Q8WU43 125 aaKnown RBP19.16■□□□□ 0.66
HDDC3-201ENST00000330334 SMARCD2Q92925 531 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 ZNF560Q96MR9 790 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 FGFBP2Q9BYJ0 223 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 PLA2G2FQ9BZM2 168 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 DNAJC25Q9H1X3 360 aa19.16■□□□□ 0.66
HDDC3-201ENST00000330334 RBAKQ9NYW8 714 aaPredicted RBP19.16■□□□□ 0.66
HDDC3-201ENST00000330334 PRPF6O94906 941 aaKnown RBP19.15■□□□□ 0.66
HDDC3-201ENST00000330334 FGF19O95750 216 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 F13A1P00488 732 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 TMC8Q8IU68 726 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 DNASE1L2Q92874 299 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 PSMG2Q969U7 264 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 E2F7Q96AV8 911 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 SAAL1Q96ER3 474 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 ZSWIM3Q96MP5 696 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 NELL2Q99435 816 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 C7orf25Q9BPX7 421 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 PYM1Q9BRP8 204 aaKnown RBP19.15■□□□□ 0.66
HDDC3-201ENST00000330334 CBWD1Q9BRT8 395 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 TRPV5Q9NQA5 729 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 CFAP45Q9UL16 551 aa19.15■□□□□ 0.66
HDDC3-201ENST00000330334 EIF3DO15371 548 aaKnown RBP eCLIP19.14■□□□□ 0.65
HDDC3-201ENST00000330334 MYL4P12829 197 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 WNT7BP56706 349 aa19.14■□□□□ 0.65
HDDC3-201ENST00000330334 TFAMQ00059 246 aaKnown RBP19.14■□□□□ 0.65
HDDC3-201ENST00000330334 WSCD1Q658N2 575 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms