RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 FAM84AQ96KN4 292 aa26.58■■□□□ 1.85
ROM1-201ENST00000278833 NSRP1Q9H0G5 558 aaKnown RBP26.58■■□□□ 1.85
ROM1-201ENST00000278833 NRBP2Q9NSY0 501 aa26.58■■□□□ 1.85
ROM1-201ENST00000278833 R3HDM2Q9Y2K5 976 aaKnown RBP26.58■■□□□ 1.85
ROM1-201ENST00000278833 GSTTP1A0A1W2PQM5 241 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 TCRBV5S1A1TA0A578 114 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 GAS2O43903 313 aaKnown RBP26.57■■□□□ 1.84
ROM1-201ENST00000278833 MAFO75444 373 aaPredicted RBP26.57■■□□□ 1.84
ROM1-201ENST00000278833 CALB1P05937 261 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 CDH5P33151 784 aaPredicted RBP26.57■■□□□ 1.84
ROM1-201ENST00000278833 CHKAP35790 457 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 CETN2P41208 172 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 TAP1Q03518 808 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 CAPSQ13938 189 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 SURF1Q15526 300 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 CDCA2Q69YH5 1023 aaPredicted RBP26.57■■□□□ 1.84
ROM1-201ENST00000278833 EXOC3L1Q86VI1 746 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 IPO4Q8TEX9 1081 aaKnown RBP26.57■■□□□ 1.84
ROM1-201ENST00000278833 ZBTB45Q96K62 511 aaPredicted RBP26.57■■□□□ 1.84
ROM1-201ENST00000278833 PCYT2Q99447 389 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 ZNF518BQ9C0D4 1074 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 CCDC113Q9H0I3 377 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 GOLGA6L7A0A1B0GV03 622 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 THAP12O43422 761 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 FARP2O94887 1054 aaPredicted RBP26.57■■□□□ 1.84
ROM1-201ENST00000278833 EDN1P05305 212 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 UBA1P22314 1058 aaKnown RBP26.57■■□□□ 1.84
ROM1-201ENST00000278833 KLRC2P26717 231 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 COPS2P61201 443 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 SNX1Q13596 522 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 FAM160B1Q5W0V3 765 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 RCOR2Q8IZ40 523 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 C2orf69Q8N8R5 385 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 FAM167AQ96KS9 214 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 SCLT1Q96NL6 688 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 DDX23Q9BUQ8 820 aaKnown RBP26.57■■□□□ 1.84
ROM1-201ENST00000278833 IMPG2Q9BZV3 1241 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 ANAPC5Q9UJX4 755 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 ACTL7BQ9Y614 415 aa26.57■■□□□ 1.84
ROM1-201ENST00000278833 TLR3O15455 904 aaKnown RBP26.56■■□□□ 1.84
ROM1-201ENST00000278833 HNRNPH1P31943 449 aaKnown RBP26.56■■□□□ 1.84
ROM1-201ENST00000278833 TTLL12Q14166 644 aaPredicted RBP26.56■■□□□ 1.84
ROM1-201ENST00000278833 ZBTB41Q5SVQ8 909 aa26.56■■□□□ 1.84
ROM1-201ENST00000278833 KCNV1Q6PIU1 500 aa26.56■■□□□ 1.84
ROM1-201ENST00000278833 CCDC25Q86WR0 208 aa26.56■■□□□ 1.84
ROM1-201ENST00000278833 OR5B17Q8NGF7 314 aa26.56■■□□□ 1.84
ROM1-201ENST00000278833 JPH2Q9BR39 696 aaPredicted RBP26.56■■□□□ 1.84
ROM1-201ENST00000278833 NINJ2Q9NZG7 142 aa26.56■■□□□ 1.84
ROM1-201ENST00000278833 TMEM191CA6NGB0 347 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 NDC80O14777 642 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 USP2O75604 605 aaPredicted RBP26.55■■□□□ 1.84
ROM1-201ENST00000278833 GSTA1P08263 222 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 CFHP08603 1231 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 TMEM191BP0C7N4 346 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 LBX2Q6XYB7 198 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 RIOX2Q8IUF8 465 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 RIBC1Q8N443 379 aaPredicted RBP26.55■■□□□ 1.84
ROM1-201ENST00000278833 NIPA2Q8N8Q9 360 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 ANKS4BQ8N8V4 417 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 FAM212AQ96EL1 285 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 RASSF9O75901 435 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 TGFB3P10600 412 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 NEDD9Q14511 834 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 FBXW10Q5XX13 1052 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 HIBCHQ6NVY1 386 aaPredicted RBP26.55■■□□□ 1.84
ROM1-201ENST00000278833 LLGL2Q6P1M3 1020 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 ZNF365Q70YC5 407 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 ZNF606Q8WXB4 792 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 CREBZFQ9NS37 354 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 PCDHGC3Q9UN70 934 aa26.55■■□□□ 1.84
ROM1-201ENST00000278833 SMIM23A6NLE4 172 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 H0YHG0 523 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 TOM1L1O75674 476 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 FKBP1BP68106 108 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 HTRA3P83110 453 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 ICE2Q659A1 982 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 SAPCD2Q86UD0 394 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 CCDC50Q8IVM0 306 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 EXOC8Q8IYI6 725 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.54■■□□□ 1.84
ROM1-201ENST00000278833 CCDC114Q96M63 670 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 MRPL4Q9BYD3 311 aaKnown RBP26.54■■□□□ 1.84
ROM1-201ENST00000278833 EURLQ9NYK6 297 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 ANKFY1Q9P2R3 1169 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 PCNTO95613 3336 aa26.54■■□□□ 1.84
ROM1-201ENST00000278833 DNAJC8O75937 253 aaPredicted RBP26.53■■□□□ 1.84
ROM1-201ENST00000278833 ADCY8P40145 1251 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 NFX1Q12986 1120 aaKnown RBP26.53■■□□□ 1.84
ROM1-201ENST00000278833 STAT4Q14765 748 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 ZCCHC9Q8N567 271 aaKnown RBP26.53■■□□□ 1.84
ROM1-201ENST00000278833 ARHGEF2Q92974 986 aaKnown RBP26.53■■□□□ 1.84
ROM1-201ENST00000278833 MSCO60682 206 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 ACSL3O95573 720 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 OAS1P00973 400 aaKnown RBP26.53■■□□□ 1.84
ROM1-201ENST00000278833 SLCO1A2P46721 670 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 PPP1R15BQ5SWA1 713 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 IER5Q5VY09 327 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 VSTM1Q6UX27 236 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 PASD1Q8IV76 773 aa26.53■■□□□ 1.84
ROM1-201ENST00000278833 LRRC34Q8IZ02 419 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms