RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 HCFC1R1Q9NWW0 138 aa20.69■□□□□ 0.9
CCDC28A-203ENST00000617445 ACOT2P49753 483 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 LILRA4P59901 499 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 ADCY1Q08828 1119 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 CWF19L1Q69YN2 538 aaKnown RBP20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 PHLDB3Q6NSJ2 640 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 PARM1Q6UWI2 310 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 NPAS3Q8IXF0 933 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 LEMD2Q8NC56 503 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 POMGNT1Q8WZA1 660 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 FGF14Q92915 247 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 INSL5Q9Y5Q6 135 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 ANK1P16157 1881 aa20.68■□□□□ 0.9
CCDC28A-203ENST00000617445 MYH15Q9Y2K3 1946 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 FRMD3A2A2Y4 597 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 PIRO00625 290 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 SPTLC2O15270 562 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 IL18RAPO95256 599 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 SEC24AO95486 1093 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 CPB1P15086 417 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 RFX1P22670 979 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 MYBPC2Q14324 1141 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 L1TD1Q5T7N2 865 aaKnown RBP20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 C9orf57Q5W0N0 161 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 IQCEQ6IPM2 695 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 HSCBQ8IWL3 235 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 GPR152Q8TDT2 470 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 ATOH1Q92858 354 aaPredicted RBP20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 SHDQ96IW2 340 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 ZNF512Q96ME7 567 aaPredicted RBP20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 CUEDC2Q9H467 287 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 DSEQ9UL01 958 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 GTF3C3Q9Y5Q9 886 aa20.67■□□□□ 0.9
CCDC28A-203ENST00000617445 ANO9A1A5B4 782 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 KRBA1A5PL33 1030 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 STK25O00506 426 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 YEATS4O95619 227 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 LDHAP00338 332 aaKnown RBP20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 ODC1P11926 461 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 IDEP14735 1019 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 PFKPQ01813 784 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 GPR17Q13304 367 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 PLD1Q13393 1074 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 CYP4A22Q5TCH4 519 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 OVOS1Q6IE37 1185 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 PANK2Q9BZ23 570 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 ARHGEF3Q9NR81 526 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 PANK4Q9NVE7 773 aa20.66■□□□□ 0.9
CCDC28A-203ENST00000617445 ECI2O75521 394 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 GCNT3O95395 438 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 HSP90AA1P07900 732 aaKnown RBP20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 NFICP08651 508 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 GARTP22102 1010 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 ADSSP30520 456 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 GUCY2FP51841 1108 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 AMPD3Q01432 767 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 RNF19BQ6ZMZ0 732 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 STXBP4Q6ZWJ1 553 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 CCDC65Q8IXS2 484 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 SENP8Q96LD8 212 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 CORO1BQ9BR76 489 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 RPP25Q9BUL9 199 aaKnown RBP20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 TNMDQ9H2S6 317 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 TMEM206Q9H813 350 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 HSFX1Q9UBD0 423 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 CA14Q9ULX7 337 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 TIMM13Q9Y5L4 95 aaPredicted RBP20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 SCN1AP35498 2009 aa20.65■□□□□ 0.9
CCDC28A-203ENST00000617445 TISP43B9A030 160 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 H0Y858 1186 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 CYP11A1P05108 521 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 GPC5P78333 572 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 SLC5A9Q2M3M2 681 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 PRSS36Q5K4E3 855 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 ATL3Q6DD88 541 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 ARMCX5Q6P1M9 558 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 CRELD2Q6UXH1 353 aaPredicted RBP20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 PDZD4Q76G19 769 aaPredicted RBP20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 CCDC105Q8IYK2 499 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 SYCP3Q8IZU3 236 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 TBC1D17Q9HA65 648 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 DPP3Q9NY33 737 aa20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 TFIP11Q9UBB9 837 aaKnown RBP20.64■□□□□ 0.89
CCDC28A-203ENST00000617445 A0A087X0B3 334 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 KIAA0391O15091 583 aaKnown RBP20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 PI15O43692 258 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 CUTAO60888 179 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 TAF6P49848 677 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 EPHA5P54756 1037 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 STARD6P59095 220 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 TWF1Q12792 350 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 METTL23Q86XA0 190 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 PDILTQ8N807 584 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 IQUBQ8NA54 791 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 DTWD2Q8NBA8 298 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 CACTINQ8WUQ7 758 aaKnown RBP20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 ING5Q8WYH8 240 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 MCRS1Q96EZ8 462 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 ASAH2Q9NR71 780 aa20.63■□□□□ 0.89
CCDC28A-203ENST00000617445 KBTBD4Q9NVX7 518 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms