RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 CKBP12277 381 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 CLCN3P51790 818 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 POU5F1BQ06416 359 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 NCBP1Q09161 790 aaKnown RBP8.16□□□□□ -1.1
FARP1-239ENST00000602171 DMP1Q13316 513 aaPredicted RBP8.16□□□□□ -1.1
FARP1-239ENST00000602171 DHX8Q14562 1220 aaKnown RBP8.16□□□□□ -1.1
FARP1-239ENST00000602171 COL19A1Q14993 1142 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 PLCL1Q15111 1095 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 PCBP1Q15365 356 aaKnown RBP eCLIP8.16□□□□□ -1.1
FARP1-239ENST00000602171 C1orf186Q6ZWK4 172 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 KCNK18Q7Z418 384 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 ZNF410Q86VK4 478 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 GPBP1Q86WP2 473 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 RHPN2Q8IUC4 686 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 C7orf61Q8IZ16 206 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 RPUSD2Q8IZ73 545 aaKnown RBP8.16□□□□□ -1.1
FARP1-239ENST00000602171 KIAA0319LQ8IZA0 1049 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 LRRC71Q8N4P6 559 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 LINC01465Q8N7H1 131 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 SLC17A8Q8NDX2 589 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 NETO1Q8TDF5 533 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 PPP1R13LQ8WUF5 828 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 CCDC47Q96A33 483 aaKnown RBP8.16□□□□□ -1.1
FARP1-239ENST00000602171 TIGD1Q96MW7 591 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 LBHD1Q9BQE6 289 aaPredicted RBP8.16□□□□□ -1.1
FARP1-239ENST00000602171 SH2D3AQ9BRG2 576 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 GCOM2Q9BZD3 368 aaPredicted RBP8.16□□□□□ -1.1
FARP1-239ENST00000602171 C2orf40Q9H1Z8 148 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 PDLIM7Q9NR12 457 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 BLOC1S4Q9NUP1 217 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 KBTBD4Q9NVX7 518 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 TBX21Q9UL17 535 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 COL4A3BPQ9Y5P4 624 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 TRPV2Q9Y5S1 764 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 SQORQ9Y6N5 450 aa8.16□□□□□ -1.1
FARP1-239ENST00000602171 DOCK5Q9H7D0 1870 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 A0A087WWV3 80 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 A0A087X0B3 334 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 GPR182O15218 404 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 HIP1RO75146 1068 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 MBD3O95983 291 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 PFKMP08237 780 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 LIG1P18858 919 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 ARL2P36404 184 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 NAMPTP43490 491 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 CRYBB1P53674 252 aaPredicted RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 NLRP11P59045 1033 aaKnown RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 MRPS6P82932 125 aaKnown RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 LAMTOR4Q0VGL1 99 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 TRIM71Q2Q1W2 868 aaKnown RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 NAALADL2Q58DX5 795 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 MFSD5Q6N075 450 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 RUFY4Q6ZNE9 571 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 LRRC8DQ7L1W4 858 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 MAEAQ7L5Y9 396 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 ZBTB8OSQ8IWT0 167 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 CCDC65Q8IXS2 484 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 ELOA2Q8IYF1 753 aaPredicted RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 SMYD4Q8IYR2 804 aaPredicted RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 DEPTORQ8TB45 409 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 PRPF31Q8WWY3 499 aaKnown RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 TMEM143Q96AN5 459 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 FANCD2OSQ96PS1 177 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 C7orf25Q9BPX7 421 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 NOC4LQ9BVI4 516 aaKnown RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 NFKBIZQ9BYH8 718 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 CELF4Q9BZC1 486 aaKnown RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 GTPBP4Q9BZE4 634 aaKnown RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 POLR3FQ9H1D9 316 aaPredicted RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 CCDC86Q9H6F5 360 aaKnown RBP8.15□□□□□ -1.1
FARP1-239ENST00000602171 PARVGQ9HBI0 331 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 SEL1LQ9UBV2 794 aa8.15□□□□□ -1.1
FARP1-239ENST00000602171 PVALEFA0A1B0GWK0 134 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 TRIM43BA6NCK2 446 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 SMC2O95347 1197 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 VTNP04004 478 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
FARP1-239ENST00000602171 IQCF3P0C7M6 154 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 FAM87AP0C7U9 286 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 SRGAP2CP0DJJ0 459 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 PLS3P13797 630 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 IDEP14735 1019 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 GAP43P17677 238 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 SFPQP23246 707 aaKnown RBP eCLIP8.14□□□□□ -1.11
FARP1-239ENST00000602171 EIF4BP23588 611 aaKnown RBP8.14□□□□□ -1.11
FARP1-239ENST00000602171 AFMP43652 599 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 GPC3P51654 580 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 EFNA5P52803 228 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 ASIC1P78348 528 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 PPIGQ13427 754 aaKnown RBP eCLIP8.14□□□□□ -1.11
FARP1-239ENST00000602171 GIT2Q14161 759 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 LONRF3Q496Y0 759 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 ARSHQ5FYA8 562 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 ZNF618Q5T7W0 954 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 CNNM4Q6P4Q7 775 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 KRBA2Q6ZNG9 492 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 TSHZ1Q6ZSZ6 1077 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 STXBP4Q6ZWJ1 553 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 SRGAP1Q7Z6B7 1085 aa8.14□□□□□ -1.11
FARP1-239ENST00000602171 MYCT1Q8N699 235 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms