RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PASD1Q8IV76 773 aa20.38■□□□□ 0.85
PRKCSH-209ENST00000589838 KATNAL2Q8IYT4 538 aa20.38■□□□□ 0.85
PRKCSH-209ENST00000589838 FEZF2Q8TBJ5 459 aa20.38■□□□□ 0.85
PRKCSH-209ENST00000589838 ZNF518BQ9C0D4 1074 aa20.38■□□□□ 0.85
PRKCSH-209ENST00000589838 NIF3L1Q9GZT8 377 aa20.38■□□□□ 0.85
PRKCSH-209ENST00000589838 CNOT10Q9H9A5 744 aaKnown RBP20.38■□□□□ 0.85
PRKCSH-209ENST00000589838 RBPJLQ9UBG7 517 aa20.38■□□□□ 0.85
PRKCSH-209ENST00000589838 UMODL1Q5DID0 1318 aa20.38■□□□□ 0.85
PRKCSH-209ENST00000589838 ACKR2O00590 384 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 TLR3O15455 904 aaKnown RBP20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 TNNC2P02585 160 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 PGK2P07205 417 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 ITIH2P19823 946 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 KCNJ1P48048 391 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 MKRN4PQ13434 485 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 BYSLQ13895 437 aaKnown RBP20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 TTLL12Q14166 644 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 HSDL1Q3SXM5 330 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 MMS22LQ6ZRQ5 1243 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 TSHZ1Q6ZSZ6 1077 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 PHLDB2Q86SQ0 1253 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 C1orf54Q8WWF1 131 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 FAM212AQ96EL1 285 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 TRIM7Q9C029 511 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 CST3P01034 146 aaPredicted RBP20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 KRT17Q04695 432 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 ADCY2Q08462 1091 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 C6orf118Q5T5N4 469 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 CCDC50Q8IVM0 306 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 ATL2Q8NHH9 583 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 EXD1Q8NHP7 514 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 PGM2Q96G03 612 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 ANKRD36BP1Q96IX9 119 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 FGD4Q96M96 766 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 TMEM109Q9BVC6 243 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 DCLK3Q9C098 648 aa20.37■□□□□ 0.85
PRKCSH-209ENST00000589838 ASB14A6NK59 587 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 TTLL13PA6NNM8 815 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 ZBTB42B2RXF5 422 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 MYO1CO00159 1063 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 CFHP08603 1231 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 TMEM191BP0C7N4 346 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 MMP8P22894 467 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 MYL6P60660 151 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 TAP1Q03518 808 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 PTK6Q13882 451 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 TTLL4Q14679 1199 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 CCDC62Q6P9F0 684 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 TRMT10CQ7L0Y3 403 aaKnown RBP20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 RHPN2Q8IUC4 686 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 LRRC71Q8N4P6 559 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 TMEM35BQ8NCS4 154 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 TLCD1Q96CP7 247 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 CLMNQ96JQ2 1002 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 MTMR12Q9C0I1 747 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 STMN4Q9H169 189 aaPredicted RBP20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 EPB41L4BQ9H329 900 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 FZD8Q9H461 694 aa20.36■□□□□ 0.85
PRKCSH-209ENST00000589838 ABLIM1O14639 778 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 IL18RAPO95256 599 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 PROZP22891 400 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 MAGOHP61326 146 aaKnown RBP20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 CCNG2Q16589 344 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 TMEM132AQ24JP5 1023 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 ATF7IP2Q5U623 682 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 C3orf20Q8ND61 904 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 SHCBP1Q8NEM2 672 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 RNF25Q96BH1 459 aaPredicted RBP20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 CDCA5Q96FF9 252 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 SNF8Q96H20 258 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 ASIC3Q9UHC3 531 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 SLC12A6Q9UHW9 1150 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 CEP83Q9Y592 693 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 B4GALT4O60513 344 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 TXNP10599 105 aaKnown RBP20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 SLC29A2Q14542 456 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 KCTD19Q17RG1 926 aaPredicted RBP20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 SKIDA1Q1XH10 827 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 C2CD6Q53TS8 623 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 MICALCLQ6ZW33 695 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 TRIM50Q86XT4 487 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 BBOF1Q8ND07 529 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 TXNRD2Q9NNW7 524 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 CISHQ9NSE2 258 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 RNF181Q9P0P0 153 aa20.35■□□□□ 0.85
PRKCSH-209ENST00000589838 SSR1P43307 286 aaKnown RBP20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 CORO7P57737 925 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 TFAMQ00059 246 aaKnown RBP20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 SNX1Q13596 522 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 ZNF699Q32M78 642 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 Q3C1V9 767 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 ZNF568Q3ZCX4 644 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 RCOR2Q8IZ40 523 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 GTF3C2Q8WUA4 911 aaPredicted RBP20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 FAXDC2Q96IV6 333 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 RBM41Q96IZ5 413 aaKnown RBP20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 SEMA4AQ9H3S1 761 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 PTPRHQ9HD43 1115 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 PCDHGC3Q9UN70 934 aa20.34■□□□□ 0.85
PRKCSH-209ENST00000589838 INO80B-WBP1J3KQ70 363 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms