RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 KMT5BQ4FZB7 885 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 CTXN3Q4LDR2 81 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 PPM1LQ5SGD2 360 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 LIN9Q5TKA1 542 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 ZNF280DQ6N043 979 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 DSTYKQ6XUX3 929 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 CCDC149Q6ZUS6 474 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 NELFCDQ8IXH7 590 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 ZNF461Q8TAF7 563 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 SENP8Q96LD8 212 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 GOLPH3LQ9H4A5 285 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 PIDD1Q9HB75 910 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 WDR6Q9NNW5 1121 aaKnown RBP11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 C11orf16Q9NQ32 467 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 AGPAT3Q9NRZ7 376 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 RBAKQ9NYW8 714 aaPredicted RBP11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 HSPBP1Q9NZL4 362 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 TIMM13Q9Y5L4 95 aaPredicted RBP11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 TSC2P49815 1807 aa11.11□□□□□ -0.63
PPP4R1-220ENST00000581835 ZNF233A6NK53 670 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 GPR37L1O60883 481 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 ZNF202O95125 648 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 OAZ2O95190 189 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 HNRNPA1P09651 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 TYMPP19971 482 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 TAF6P49848 677 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 ARPP19P56211 112 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 SNRPFP62306 86 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 TFAMQ00059 246 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 YWHAHQ04917 246 aaPredicted RBP11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 STK4Q13043 487 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 PSMD2Q13200 908 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 KNOP1Q1ED39 458 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 KRBA2Q6ZNG9 492 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 RTL10Q7L3V2 364 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 CBWD2Q8IUF1 395 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 ZDHHC14Q8IZN3 488 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 PLCD3Q8N3E9 789 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 TDRD5Q8NAT2 981 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 KIAA0895Q8NCT3 520 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 SLC7A14Q8TBB6 771 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 NOC3LQ8WTT2 800 aaKnown RBP11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 PDE11AQ9HCR9 933 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 EXOC1Q9NV70 894 aa11.1□□□□□ -0.63
PPP4R1-220ENST00000581835 CLUHO75153 1309 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 FAM86C2PA6NEL3 165 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 TULP1O00294 542 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 CLIC2O15247 247 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 CCL16O15467 120 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 N4BP1O75113 896 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 RPN1P04843 607 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 CYP11A1P05108 521 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 POU2F2P09086 479 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 ODC1P11926 461 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 ATF2P15336 505 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 DPYDQ12882 1025 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 PTPN21Q16825 1174 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 TMEM31Q5JXX7 168 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 TPGS2Q68CL5 300 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 SCARA3Q6AZY7 606 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 HS2ST1Q7LGA3 356 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 OTOP3Q7RTS5 596 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 USP37Q86T82 979 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 C12orf56Q8IXR9 622 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 C1orf127Q8N9H9 656 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 CXorf38Q8TB03 319 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 CACTINQ8WUQ7 758 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 EDAQ92838 391 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 ACSF2Q96CM8 615 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 BORCS6Q96GS4 357 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 LRFN3Q9BTN0 628 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 OXCT2Q9BYC2 517 aaPredicted RBP11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 KIAA1586Q9HCI6 787 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 CGNQ9P2M7 1197 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 LIMD1Q9UGP4 676 aa11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 AFF4Q9UHB7 1163 aaKnown RBP11.09□□□□□ -0.63
PPP4R1-220ENST00000581835 ARHGEF37A1IGU5 675 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 KPNA7A9QM74 516 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 CYB561D2O14569 222 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 XYLBO75191 536 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 RHOBTB3O94955 611 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 SEC24AO95486 1093 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 ITGB3P05106 788 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 CPB1P15086 417 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 POLR2BP30876 1174 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 ELF1P32519 619 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 CYP2J2P51589 502 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 ZXDAP98168 799 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 ADCY1Q08828 1119 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 SURF1Q15526 300 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 SNRNP35Q16560 246 aaKnown RBP11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 SV2CQ496J9 727 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 LMBRD2Q68DH5 695 aaPredicted RBP11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 OVOS1Q6IE37 1185 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 GRASPQ7Z6J2 395 aaPredicted RBP11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 TCEAL8Q8IYN2 117 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 FMR1NBQ8N0W7 255 aaPredicted RBP11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 CSGALNACT2Q8N6G5 542 aa11.08□□□□□ -0.64
PPP4R1-220ENST00000581835 XXYLT1Q8NBI6 393 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms