RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 TTC17Q96AE7 1141 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 TMEM143Q96AN5 459 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 ZDHHC15Q96MV8 337 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 MXRA8Q9BRK3 442 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 DENND2DQ9H6A0 471 aaPredicted RBP18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 PCSK1NQ9UHG2 260 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 TBX20Q9UMR3 447 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 P4HBP07237 508 aaKnown RBP18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 KIFAP3Q92845 792 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 FNBP1Q96RU3 617 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 PLVAPQ9BX97 442 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 C1orf112Q9NSG2 853 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 WHRNQ9P202 907 aa18.06■□□□□ 0.48
PPP4R3A-208ENST00000555462 NT5C2P49902 561 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 MRPS9P82933 396 aaKnown RBP18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 SLC39A4Q6P5W5 647 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 MAGEB18Q96M61 343 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 MCEEQ96PE7 176 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 ROPN1BQ9BZX4 212 aaPredicted RBP18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 TMEM206Q9H813 350 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 ROPN1Q9HAT0 212 aaPredicted RBP18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 SEL1LQ9UBV2 794 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 TJP2Q9UDY2 1190 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 PTPRJQ12913 1337 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 LRRC36Q1X8D7 754 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 KHDC1Q4VXA5 237 aaKnown RBP18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 ANKRD22Q5VYY1 191 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 CYTH2Q99418 400 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 GINM1Q9NU53 330 aa18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.05■□□□□ 0.48
PPP4R3A-208ENST00000555462 COL14A1Q05707 1796 aaKnown RBP18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 MAST2Q6P0Q8 1798 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 GZMAP12544 262 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 CYP1B1Q16678 543 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 MTERF2Q49AM1 385 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 CC2D2BQ6DHV5 1058 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 OTOAQ7RTW8 1153 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 ANKRD35Q8N283 1001 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 ZNF341Q9BYN7 854 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 CCNE2O96020 404 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 VIL1P09327 827 aaKnown RBP18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 T-ENOLP0DO92 83 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 NLRP11P59045 1033 aaKnown RBP18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 RCN2Q14257 317 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 MUM1Q2TAK8 710 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 BRDTQ58F21 947 aaPredicted RBP18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 FAXCQ5TGI0 409 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 TATDN1Q6P1N9 297 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 DCUN1D2Q6PH85 259 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 SLC25A41Q8N5S1 370 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 GMCL1Q96IK5 515 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 TRIM56Q9BRZ2 755 aaKnown RBP18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 SHCBP1LQ9BZQ2 653 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 GABBR1Q9UBS5 961 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 ZFP69BQ9UJL9 534 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 KIF1CO43896 1103 aaKnown RBP18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 GCAP28676 217 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 ATP5DP30049 168 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 DMP1Q13316 513 aaPredicted RBP18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 MSS51Q4VC12 460 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 TNFAIP8L3Q5GJ75 292 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 ZBTB33Q86T24 672 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 RHPN2Q8IUC4 686 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 CERKQ8TCT0 537 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 PTPRN2Q92932 1015 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 PRKAG3Q9UGI9 489 aa18.04■□□□□ 0.48
PPP4R3A-208ENST00000555462 COL16A1Q07092 1604 aaPredicted RBP18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 TCRBV7S3A2A0A539 114 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 AVILO75366 819 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 FAM155BO75949 473 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 KRT36O76013 467 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 PTDSS1P48651 473 aaKnown RBP18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 CTCFP49711 727 aaPredicted RBP18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 GDF10P55107 478 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 SLC15A2Q16348 729 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 TKFCQ3LXA3 575 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 SWSAP1Q6NVH7 229 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 ASRGL1Q7L266 308 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 DLGAP2Q9P1A6 1054 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 ASTN2O75129 1339 aaPredicted RBP18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 PEX11AO75192 247 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 AP1G2O75843 785 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 POLGP54098 1239 aaPredicted RBP18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 MEX3CQ5U5Q3 659 aaKnown RBP18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 RNF220Q5VTB9 566 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 NLRP9Q7RTR0 991 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 FMNL3Q8IVF7 1028 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 EMC1Q8N766 993 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 UVRAGQ9P2Y5 699 aa18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 SEPT9Q9UHD8 586 aaPredicted RBP18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 MRPL11Q9Y3B7 192 aaKnown RBP18.03■□□□□ 0.48
PPP4R3A-208ENST00000555462 E2F8A0AVK6 867 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 HLA-DRAP01903 254 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 WEE2P0C1S8 567 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 GNA15P30679 374 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 RFC5P40937 340 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 PTK6Q13882 451 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 SPARCL1Q14515 664 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 DACT2Q5SW24 774 aa18.02■□□□□ 0.48
PPP4R3A-208ENST00000555462 ANO5Q75V66 913 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms