RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 HSFX1Q9UBD0 423 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 TUBGCP4Q9UGJ1 667 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 CPSF3Q9UKF6 684 aaKnown RBP7.19□□□□□ -1.26
SLIRP-203ENST00000554074 CA14Q9ULX7 337 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 DERAQ9Y315 318 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 SIT1Q9Y3P8 196 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 STYXL1Q9Y6J8 313 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 SPAG17Q6Q759 2223 aa7.19□□□□□ -1.26
SLIRP-203ENST00000554074 PRR23AA6NEV1 266 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 LACTBL1A8MY62 500 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 STK25O00506 426 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 PPP1R37O75864 691 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 SEC24AO95486 1093 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 KRT18P05783 430 aaKnown RBP7.18□□□□□ -1.26
SLIRP-203ENST00000554074 MARCKSP29966 332 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-203ENST00000554074 TNFSF9P41273 254 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 YWHAHQ04917 246 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-203ENST00000554074 GRIN1Q05586 938 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 GPR17Q13304 367 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 PLD1Q13393 1074 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 MYBPC2Q14324 1141 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 MLF2Q15773 248 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-203ENST00000554074 ENOX2Q16206 610 aaKnown RBP7.18□□□□□ -1.26
SLIRP-203ENST00000554074 SLC5A9Q2M3M2 681 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 SEZ6Q53EL9 994 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 CYP4A22Q5TCH4 519 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 IQCEQ6IPM2 695 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 SLC39A4Q6P5W5 647 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 ASCL5Q7RTU5 278 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 ELMOD1Q8N336 334 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 KRI1Q8N9T8 703 aaKnown RBP7.18□□□□□ -1.26
SLIRP-203ENST00000554074 RASSF8Q8NHQ8 419 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 DNASE1L2Q92874 299 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 NKD2Q969F2 451 aaPredicted RBP7.18□□□□□ -1.26
SLIRP-203ENST00000554074 ELSPBP1Q96BH3 223 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 INTS4Q96HW7 963 aaKnown RBP7.18□□□□□ -1.26
SLIRP-203ENST00000554074 NELL2Q99435 816 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 MSTO1Q9BUK6 570 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 CYP4F11Q9HBI6 524 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 TRPV5Q9NQA5 729 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 SEL1LQ9UBV2 794 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 CCDC39Q9UFE4 941 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 C2CD2Q9Y426 696 aa7.18□□□□□ -1.26
SLIRP-203ENST00000554074 HELZP42694 1942 aaKnown RBP7.18□□□□□ -1.26
SLIRP-203ENST00000554074 COL4A3Q01955 1670 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 KANSL1LA0AUZ9 987 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ANO9A1A5B4 782 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 VPS37CA5D8V6 355 aaPredicted RBP7.17□□□□□ -1.26
SLIRP-203ENST00000554074 PIRO00625 290 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 CYP11A1P05108 521 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ODC1P11926 461 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 CPB1P15086 417 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 CEBPBP17676 345 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 GAP43P17677 238 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 SYT1P21579 422 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 FCARP24071 287 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 NMT1P30419 496 aaKnown RBP7.17□□□□□ -1.26
SLIRP-203ENST00000554074 TXLNAP40222 546 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ARPP19P56211 112 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 LILRA4P59901 499 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ADCY1Q08828 1119 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 DHX8Q14562 1220 aaKnown RBP7.17□□□□□ -1.26
SLIRP-203ENST00000554074 POSTNQ15063 836 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ZNF528Q3MIS6 628 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 SLC44A4Q53GD3 710 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ZBTB41Q5SVQ8 909 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ZC3H14Q6PJT7 736 aaKnown RBP7.17□□□□□ -1.26
SLIRP-203ENST00000554074 RNF19BQ6ZMZ0 732 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 PDZD4Q76G19 769 aaPredicted RBP7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ZNF720Q7Z2F6 126 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 FRMD5Q7Z6J6 570 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 USP37Q86T82 979 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 NT5DC4Q86YG4 428 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 C1orf210Q8IVY1 113 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 DEPDC1BQ8WUY9 529 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ING5Q8WYH8 240 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 E2F7Q96AV8 911 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 MCRS1Q96EZ8 462 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 EPSTI1Q96J88 318 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ZNF512Q96ME7 567 aaPredicted RBP7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ASB16Q96NS5 453 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 KXD1Q9BQD3 176 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 CORO1BQ9BR76 489 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 STRA6Q9BX79 667 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 GPR88Q9GZN0 384 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 TRPV4Q9HBA0 871 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ZFP14Q9HCL3 533 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ASAH2Q9NR71 780 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 OLFML3Q9NRN5 406 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 CEP72Q9P209 647 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 FBXO2Q9UK22 296 aaPredicted RBP7.17□□□□□ -1.26
SLIRP-203ENST00000554074 DSEQ9UL01 958 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 ASB3Q9Y575 518 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 SRPRBQ9Y5M8 271 aaKnown RBP7.17□□□□□ -1.26
SLIRP-203ENST00000554074 CLIC4Q9Y696 253 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 MYH10P35580 1976 aa7.17□□□□□ -1.26
SLIRP-203ENST00000554074 FRYLO94915 3013 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 MYO16Q9Y6X6 1858 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 FRMD3A2A2Y4 597 aa7.16□□□□□ -1.26
SLIRP-203ENST00000554074 NCAM2O15394 837 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms