RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 C4orf32Q8N8J7 132 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 TADA1Q96BN2 335 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 GINS4Q9BRT9 223 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 TBC1D23Q9NUY8 699 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 ZFP69BQ9UJL9 534 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
U2AF1-209ENST00000475639 NR2E1Q9Y466 385 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 DIP2BQ9P265 1576 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 SERPING1P05155 500 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 VCAM1P19320 739 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 C4BPBP20851 252 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 VCPP55072 806 aaKnown RBP12.1□□□□□ -0.47
U2AF1-209ENST00000475639 KCNMA1Q12791 1236 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 TRIP13Q15645 432 aaPredicted RBP12.1□□□□□ -0.47
U2AF1-209ENST00000475639 LRRC57Q8N9N7 239 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 CDHR1Q96JP9 859 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 ZFYVE19Q96K21 471 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 FAM161BQ96MY7 647 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 C8orf37Q96NL8 207 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 MLXIPLQ9NP71 852 aa12.1□□□□□ -0.47
U2AF1-209ENST00000475639 NEMP1O14524 444 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 LZTS3O60299 673 aaPredicted RBP12.09□□□□□ -0.47
U2AF1-209ENST00000475639 SPATA31D3P0C874 917 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 ANGPT1Q15389 498 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 MFSD14BQ5SR56 506 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 SPATA31D4Q6ZUB0 917 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 EXOC3L1Q86VI1 746 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 IFNL3Q8IZI9 196 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 CNBD2Q96M20 576 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 YIPF2Q9BWQ6 316 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 CASS4Q9NQ75 786 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 HACD3Q9P035 362 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 KLHL8Q9P2G9 620 aaPredicted RBP12.09□□□□□ -0.47
U2AF1-209ENST00000475639 TNKSO95271 1327 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 MROH5Q6ZUA9 1318 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 RPTORQ8N122 1335 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 ATP9AO75110 1047 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 TJP3O95049 919 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 PLEKHA8P1O95397 391 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 PCCAP05165 728 aaPredicted RBP12.09□□□□□ -0.47
U2AF1-209ENST00000475639 CREB1P16220 341 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 ANXA13P27216 316 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 SMARCA1P28370 1054 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 HADHAP40939 763 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 KLRC3Q07444 240 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 CNPY1Q3B7I2 92 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 ALKBH5Q6P6C2 394 aaKnown RBP12.09□□□□□ -0.47
U2AF1-209ENST00000475639 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 DENND2DQ9H6A0 471 aaPredicted RBP12.09□□□□□ -0.47
U2AF1-209ENST00000475639 PIH1D3Q9NQM4 214 aaKnown RBP12.09□□□□□ -0.47
U2AF1-209ENST00000475639 KMT5AQ9NQR1 393 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 TMCO1Q9UM00 188 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 CYP1A1P04798 512 aaPredicted RBP12.09□□□□□ -0.47
U2AF1-209ENST00000475639 ARFIP2P53365 341 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 CCDC15Q0P6D6 951 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 SLFN13Q68D06 897 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 RINLQ6ZS11 566 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 NCSTNQ92542 709 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 GATA6Q92908 595 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 OTULINQ96BN8 352 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 CRAMP1Q96RY5 1269 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
U2AF1-209ENST00000475639 SEMA4AQ9H3S1 761 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 C10orf88Q9H8K7 445 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 NFKBIL1Q9UBC1 381 aaPredicted RBP12.09□□□□□ -0.47
U2AF1-209ENST00000475639 AKT3Q9Y243 479 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 PNPLA7Q6ZV29 1317 aa12.09□□□□□ -0.47
U2AF1-209ENST00000475639 MIF4GDA9UHW6 222 aaKnown RBP12.08□□□□□ -0.47
U2AF1-209ENST00000475639 NOL4O94818 638 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 TARSP26639 723 aaKnown RBP12.08□□□□□ -0.47
U2AF1-209ENST00000475639 RPS8P62241 208 aaKnown RBP12.08□□□□□ -0.47
U2AF1-209ENST00000475639 AUHQ13825 339 aaKnown RBP12.08□□□□□ -0.47
U2AF1-209ENST00000475639 RNF43Q68DV7 783 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 MIGA2Q7L4E1 593 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 PPHLN1Q8NEY8 458 aaKnown RBP12.08□□□□□ -0.47
U2AF1-209ENST00000475639 FAF2Q96CS3 445 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 CCDC17Q96LX7 622 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 FAM192AQ9GZU8 254 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 AP5M1Q9H0R1 490 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 SAYSD1Q9NPB0 183 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 TMEM161AQ9NX61 479 aa12.08□□□□□ -0.47
U2AF1-209ENST00000475639 FAM32AQ9Y421 112 aaKnown RBP12.08□□□□□ -0.47
U2AF1-209ENST00000475639 BAZ2BQ9UIF8 2168 aaKnown RBP12.08□□□□□ -0.48
U2AF1-209ENST00000475639 MROH7Q68CQ1 1323 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 GON4LQ3T8J9 2241 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 CCDC22O60826 627 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 GFPT2O94808 682 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 SFSWAPQ12872 951 aaKnown RBP12.08□□□□□ -0.48
U2AF1-209ENST00000475639 KRT72Q14CN4 511 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 GPATCH4Q5T3I0 446 aaKnown RBP12.08□□□□□ -0.48
U2AF1-209ENST00000475639 TBC1D9BQ66K14 1250 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 ARL6IP4Q66PJ3 421 aaKnown RBP12.08□□□□□ -0.48
U2AF1-209ENST00000475639 RASGEF1CQ8N431 466 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 PHACTR1Q9C0D0 580 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 MYLK2Q9H1R3 596 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 BFARQ9NZS9 450 aa12.08□□□□□ -0.48
U2AF1-209ENST00000475639 HAO1Q9UJM8 370 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms