RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 FBXL16Q8N461 479 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ATPAF2Q8N5M1 289 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 HEXDCQ8WVB3 486 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 FAXDC2Q96IV6 333 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 TMEM237Q96Q45 408 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 EFHD1Q9BUP0 239 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 RIOX1Q9H6W3 641 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SELENONQ9NZV5 590 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 DDX20Q9UHI6 824 aaKnown RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 DNAJC12Q9UKB3 198 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 INTUQ9ULD6 942 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 MAPRE3Q9UPY8 281 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 A0A088AWK7 358 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SMIM35A0A1B0GVV1 85 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 hCG_1642624A0A1W2PR95 340 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 EIF4E1BA6NMX2 242 aaKnown RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PIK3CDO00329 1044 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 O00370 1275 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 APOL1O14791 398 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SEPT4O43236 478 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PQBP1O60828 265 aaKnown RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 MBL2P11226 248 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF10P21506 573 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CHKAP35790 457 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ARHGAP25P42331 645 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 RFX5P48382 616 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 NPY2RP49146 381 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 OSTNP61366 133 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PFKPQ01813 784 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 GRIK3Q13003 919 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PNOCQ13519 176 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PTK6Q13882 451 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PPP1R15BQ5SWA1 713 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 NUGGCQ68CJ6 796 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 RCOR2Q8IZ40 523 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CACNA2D3Q8IZS8 1091 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 MICALL1Q8N3F8 863 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF655Q8N720 491 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 FBXO32Q969P5 355 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SERPINB11Q96P15 392 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CALN1Q9BXU9 219 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 INTS2Q9H0H0 1204 aaKnown RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PCIF1Q9H4Z3 704 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 TRMT1Q9NXH9 659 aaKnown RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SPG21Q9NZD8 308 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PCDHB2Q9Y5E7 798 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ABHD14A-ACY1A0A1B0GW23 586 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 LRRD1A4D1F6 860 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 GRID2IPA4D2P6 1211 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CHUKO15111 745 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ATP1A1P05023 1023 aaKnown RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CD58P19256 250 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CTNNB1P35222 781 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 MSH2P43246 934 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 GEMP55040 296 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 MYL6P60660 151 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 YWHAGP61981 247 aaKnown RBP eCLIP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PRAMEP78395 509 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 PTK7Q13308 1070 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 NCOA4Q13772 614 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 C6orf118Q5T5N4 469 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 BTNL9Q6UXG8 535 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 RAPH1Q70E73 1250 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 STRADAQ7RTN6 431 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 RABEPKQ7Z6M1 372 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 C1orf131Q8NDD1 294 aaKnown RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ZNF248Q8NDW4 579 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SYTL5Q8TDW5 730 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ZKSCAN4Q969J2 545 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CGRRF1Q99675 332 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 NUF2Q9BZD4 464 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SENP6Q9GZR1 1112 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 MUC3BQ9H195 1237 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 DPP3Q9NY33 737 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 HSPBP1Q9NZL4 362 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CALCOCO1Q9P1Z2 691 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SUN2Q9UH99 717 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ASB3Q9Y575 518 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SYNJ2BP-COX16A0A087WUM0 186 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ANO9A1A5B4 782 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 TTLL13PA6NNM8 815 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 GOLGA8KD6RF30 607 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 RGS16O15492 202 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 TLL1O43897 1013 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SMIM24O75264 130 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 RTN2O75298 545 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 HTR7P34969 479 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ATP6V1E1P36543 226 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SULT1E1P49888 294 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 YWHAHQ04917 246 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 FPGSQ05932 587 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 ZDHHC20Q5W0Z9 365 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 KLHL35Q6PF15 583 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 FBXO46Q6PJ61 603 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 TMEM270Q6UE05 265 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 CHSY1Q86X52 802 aa4.87□□□□□ -1.63
CCNL1-215ENST00000474539 SYT2Q8N9I0 419 aaPredicted RBP4.87□□□□□ -1.63
CCNL1-215ENST00000474539 MAGEC3Q8TD91 643 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms