RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 M0QZQ0 153 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 FAM189A1O60320 539 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 NFICP08651 508 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 MYL4P12829 197 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 NASPP49321 788 aaPredicted RBP10.07□□□□□ -0.8
NUP50-206ENST00000422489 CDR1P51861 262 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 LILRA4P59901 499 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 KCNA1Q09470 495 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 TWF1Q12792 350 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 CYP4A22Q5TCH4 519 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 C9orf57Q5W0N0 161 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 TPGS2Q68CL5 300 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 OVOS1Q6IE37 1185 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 MTSS1LQ765P7 747 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 PDZD4Q76G19 769 aaPredicted RBP10.07□□□□□ -0.8
NUP50-206ENST00000422489 CCDC65Q8IXS2 484 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 HS6ST3Q8IZP7 471 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 LINC00301Q8NCQ3 95 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 KCNN1Q92952 543 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 SENP8Q96LD8 212 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 TSPAN18Q96SJ8 248 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 KXD1Q9BQD3 176 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 LRRC27Q9C0I9 530 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 PCIF1Q9H4Z3 704 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 ASB7Q9H672 318 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 DPP3Q9NY33 737 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 SEL1LQ9UBV2 794 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 AFF4Q9UHB7 1163 aaKnown RBP10.07□□□□□ -0.8
NUP50-206ENST00000422489 KCNH3Q9ULD8 1083 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 SLC27A5Q9Y2P5 690 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 INSL5Q9Y5Q6 135 aa10.07□□□□□ -0.8
NUP50-206ENST00000422489 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.07□□□□□ -0.8
NUP50-206ENST00000422489 GOLGA8IPA6NC78 632 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 OR6C75A6NL08 312 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 GOLGA8JA6NMD2 632 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 ZNF197O14709 1029 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 SPTLC1O15269 473 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 PRPF6O94906 941 aaKnown RBP10.06□□□□□ -0.8
NUP50-206ENST00000422489 OAZ2O95190 189 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 ADRB2P07550 413 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 AOC1P19801 751 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 ADSSP30520 456 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 NUBP1P53384 320 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 TFAMQ00059 246 aaKnown RBP10.06□□□□□ -0.8
NUP50-206ENST00000422489 DUSP4Q13115 394 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 SNW1Q13573 536 aaKnown RBP10.06□□□□□ -0.8
NUP50-206ENST00000422489 SLC5A9Q2M3M2 681 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 L1TD1Q5T7N2 865 aaKnown RBP10.06□□□□□ -0.8
NUP50-206ENST00000422489 CWF19L1Q69YN2 538 aaKnown RBP10.06□□□□□ -0.8
NUP50-206ENST00000422489 CRELD2Q6UXH1 353 aaPredicted RBP10.06□□□□□ -0.8
NUP50-206ENST00000422489 METTL23Q86XA0 190 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 NPAS3Q8IXF0 933 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 DHX58Q96C10 678 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 HVCN1Q96D96 273 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 TCEAL4Q96EI5 215 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 SAAL1Q96ER3 474 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 RTP3Q9BQQ7 232 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 PYM1Q9BRP8 204 aaKnown RBP10.06□□□□□ -0.8
NUP50-206ENST00000422489 DERAQ9Y315 318 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 STYXL1Q9Y6J8 313 aa10.06□□□□□ -0.8
NUP50-206ENST00000422489 TDRD15B5MCY1 1934 aaKnown RBP10.05□□□□□ -0.8
NUP50-206ENST00000422489 C5orf42Q9H799 3197 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.05□□□□□ -0.8
NUP50-206ENST00000422489 PIRO00625 290 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 CYB561D2O14569 222 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 CUTAO60888 179 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 PPP6R2O75170 966 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 IL18RAPO95256 599 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 LDHAP00338 332 aaKnown RBP10.05□□□□□ -0.8
NUP50-206ENST00000422489 POU2F2P09086 479 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 ZSCAN22P10073 491 aaPredicted RBP10.05□□□□□ -0.8
NUP50-206ENST00000422489 ODC1P11926 461 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 GJA1P17302 382 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 CEBPBP17676 345 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 PAX3P23760 479 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 ALDH1A3P47895 512 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 AARSP49588 968 aaKnown RBP eCLIP10.05□□□□□ -0.8
NUP50-206ENST00000422489 TAF6P49848 677 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 CASP5P51878 434 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 AMPD3Q01432 767 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 SLC44A4Q53GD3 710 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 TANGO2Q6ICL3 276 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 THEM5Q8N1Q8 247 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 IQUBQ8NA54 791 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 DTWD2Q8NBA8 298 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 HPS3Q969F9 1004 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 TMEM209Q96SK2 561 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 STRA6Q9BX79 667 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 OXCT2Q9BYC2 517 aaPredicted RBP10.05□□□□□ -0.8
NUP50-206ENST00000422489 FGFBP2Q9BYJ0 223 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 PLA2G2FQ9BZM2 168 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 TMEM206Q9H813 350 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 TBC1D17Q9HA65 648 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 ARHGEF3Q9NR81 526 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 SLC2A4RGQ9NR83 387 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 GDE1Q9NZC3 331 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 CEP72Q9P209 647 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 MAFFQ9ULX9 164 aa10.05□□□□□ -0.8
NUP50-206ENST00000422489 AGAP1Q9UPQ3 857 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms