RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 AFMIDQ63HM1 303 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TPGS2Q68CL5 300 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TRIM65Q6PJ69 517 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 NECAB2Q7Z6G3 386 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TMEM110Q86TL2 294 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 RAB11FIP4Q86YS3 637 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 SLC39A11Q8N1S5 342 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 DTX3LQ8TDB6 740 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 SEC14L1Q92503 715 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 GAS2L1Q99501 681 aaPredicted RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 HNRNPABQ99729 332 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 ACBD6Q9BR61 282 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 FAM126AQ9BYI3 521 aaPredicted RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 MTRRQ9UBK8 725 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 MSRAQ9UJ68 235 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 PCDHGC5Q9Y5F6 944 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 OR6C75A6NL08 312 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 CETN3O15182 167 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 XPOTO43592 962 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 VNN2O95498 520 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 GYPCP04921 128 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 CTNNA2P26232 953 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 YWHAEP62258 255 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 GUCY1B3Q02153 619 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 FRG1Q14331 258 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 CTC1Q2NKJ3 1217 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 CLLU1OSQ5K130 101 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TMEM240Q5SV17 173 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 C9orf57Q5W0N0 161 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 LEMD2Q8NC56 503 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 MCRS1Q96EZ8 462 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 GLT1D1Q96MS3 346 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TWSG1Q9GZX9 223 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 ZBP1Q9H171 429 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 FAM105AQ9NUU6 356 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNHIT6Q9NWK9 470 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 RRN3Q9NYV6 651 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 APEX2Q9UBZ4 518 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 LRFN2Q9ULH4 789 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 SCAF8Q9UPN6 1271 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 IPPQ9Y573 584 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 F8VZ95 297 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TBCAO75347 108 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 CYP2C9P11712 490 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 HCAR3P49019 387 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 VAMP7P51809 220 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TAP1Q03518 808 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 C1QBPQ07021 282 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TUSC3Q13454 348 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 ZRSR2Q15696 482 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 XKR9Q5GH70 373 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TDRD10Q5VZ19 366 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 PLPP4Q5VZY2 271 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 SPECC1LQ69YQ0 1117 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TRAPPC11Q7Z392 1133 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 MTERF4Q7Z6M4 381 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 ABI1Q8IZP0 508 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 CACTINQ8WUQ7 758 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 FRMD8P1Q9BZ68 369 aaPredicted RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 NEU3Q9UQ49 428 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 GDAQ9Y2T3 454 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TNRC18O15417 2968 aaPredicted RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 DENND3A2RUS2 1198 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF233A6NK53 670 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TPD52L2O43399 206 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 SCNN1GP51170 649 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 GPS2Q13227 327 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 AAK1Q2M2I8 961 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 ANO6Q4KMQ2 910 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF618Q5T7W0 954 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 DRICH1Q6PGQ1 229 aaPredicted RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TSC1Q92574 1164 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 EXOC4Q96A65 974 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 CNOT6LQ96LI5 555 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 RCOR3Q9P2K3 495 aaPredicted RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 AGO2Q9UKV8 859 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 NME7Q9Y5B8 376 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 FAM13AO94988 1023 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 KRT18P05783 430 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 WNT7BP56706 349 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 SYCP1Q15431 976 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 PLEKHA7Q6IQ23 1121 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 SEPT14Q6ZU15 432 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 C1orf127Q8N9H9 656 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 C12orf50Q8NA57 414 aaPredicted RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 C1orf131Q8NDD1 294 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 SEPT9Q9UHD8 586 aaPredicted RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 TMEM59LQ9UK28 342 aa3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 DDX49Q9Y6V7 483 aaKnown RBP3.94□□□□□ -1.78
FNDC3A-202ENST00000398316 ZBTB39O15060 712 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 NCK2O43639 380 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 MYCLP12524 364 aaPredicted RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 CHRNB2P17787 502 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 ZNF165P49910 485 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 BPIFB4P59827 614 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 WDR5P61964 334 aaKnown RBP3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 PPP3CAQ08209 521 aa3.93□□□□□ -1.78
FNDC3A-202ENST00000398316 BTG3Q14201 252 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms