RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 CLPTM1LQ96KA5 538 aa17.72■□□□□ 0.43
SIPA1-201ENST00000394224 SERPINB12Q96P63 405 aa17.72■□□□□ 0.43
SIPA1-201ENST00000394224 RPS6KC1Q96S38 1066 aa17.72■□□□□ 0.43
SIPA1-201ENST00000394224 TTC1Q99614 292 aa17.72■□□□□ 0.43
SIPA1-201ENST00000394224 CALN1Q9BXU9 219 aa17.72■□□□□ 0.43
SIPA1-201ENST00000394224 MAK16Q9BXY0 300 aaKnown RBP17.72■□□□□ 0.43
SIPA1-201ENST00000394224 DMAC2Q9NW81 257 aa17.72■□□□□ 0.43
SIPA1-201ENST00000394224 CNOT7Q9UIV1 285 aaKnown RBP17.72■□□□□ 0.43
SIPA1-201ENST00000394224 MROH7Q68CQ1 1323 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 CSDE1O75534 798 aaKnown RBP17.71■□□□□ 0.43
SIPA1-201ENST00000394224 FAM155BO75949 473 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 CCND1P24385 295 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 RFC5P40937 340 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 ZNF268Q14587 947 aaPredicted RBP17.71■□□□□ 0.43
SIPA1-201ENST00000394224 CDO1Q16878 200 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 TMEM154Q6P9G4 183 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 EIF1ADQ8N9N8 165 aaKnown RBP17.71■□□□□ 0.43
SIPA1-201ENST00000394224 PPP1R1BQ9UD71 204 aaPredicted RBP17.71■□□□□ 0.43
SIPA1-201ENST00000394224 DIS3Q9Y2L1 958 aaKnown RBP17.71■□□□□ 0.43
SIPA1-201ENST00000394224 GRAP2O75791 330 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 KRT36O76013 467 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 UNC5CO95185 931 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 ALDH3A1P30838 453 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 CETN2P41208 172 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 LIG4P49917 911 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 MECRQ9BV79 373 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 TMOD2Q9NZR1 351 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 TJP2Q9UDY2 1190 aa17.71■□□□□ 0.43
SIPA1-201ENST00000394224 F7P08709 466 aaPredicted RBP17.71■□□□□ 0.42
SIPA1-201ENST00000394224 GBP1P32455 592 aa17.71■□□□□ 0.42
SIPA1-201ENST00000394224 RCN1Q15293 331 aa17.71■□□□□ 0.42
SIPA1-201ENST00000394224 C3orf62Q6ZUJ4 267 aa17.71■□□□□ 0.42
SIPA1-201ENST00000394224 PALM2Q8IXS6 379 aa17.71■□□□□ 0.42
SIPA1-201ENST00000394224 MCOLN2Q8IZK6 566 aa17.71■□□□□ 0.42
SIPA1-201ENST00000394224 HSPH1Q92598 858 aa17.71■□□□□ 0.42
SIPA1-201ENST00000394224 DENND2DQ9H6A0 471 aaPredicted RBP17.71■□□□□ 0.42
SIPA1-201ENST00000394224 HEY2Q9UBP5 337 aa17.71■□□□□ 0.42
SIPA1-201ENST00000394224 NUMBLQ9Y6R0 609 aa17.71■□□□□ 0.42
SIPA1-201ENST00000394224 KRT19P08727 400 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 BRD2P25440 801 aaKnown RBP17.7■□□□□ 0.42
SIPA1-201ENST00000394224 GNA15P30679 374 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 YWHAGP61981 247 aaKnown RBP eCLIP17.7■□□□□ 0.42
SIPA1-201ENST00000394224 SPARCL1Q14515 664 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 KHDC1Q4VXA5 237 aaKnown RBP17.7■□□□□ 0.42
SIPA1-201ENST00000394224 C3orf20Q8ND61 904 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 HELQQ8TDG4 1101 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 SYNCQ9H7C4 482 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 PACSIN3Q9UKS6 424 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 C21orf2O43822 256 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 P4HBP07237 508 aaKnown RBP17.7■□□□□ 0.42
SIPA1-201ENST00000394224 PTDSS1P48651 473 aaKnown RBP17.7■□□□□ 0.42
SIPA1-201ENST00000394224 NLRP9Q7RTR0 991 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 PSPC1Q8WXF1 523 aaKnown RBP17.7■□□□□ 0.42
SIPA1-201ENST00000394224 ARAP2Q8WZ64 1704 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 TMEM206Q9H813 350 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 MAPK13O15264 365 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 FDX1P10109 184 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 HSPA6P17066 643 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 ATXN3P54252 364 aaPredicted RBP17.7■□□□□ 0.42
SIPA1-201ENST00000394224 MAPK6Q16659 721 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 CFAP36Q96G28 342 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 FAM111AQ96PZ2 611 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 TBX20Q9UMR3 447 aa17.7■□□□□ 0.42
SIPA1-201ENST00000394224 SERPINB3P29508 390 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 KPNB1Q14974 876 aaKnown RBP17.69■□□□□ 0.42
SIPA1-201ENST00000394224 RC3H1Q5TC82 1133 aaKnown RBP17.69■□□□□ 0.42
SIPA1-201ENST00000394224 ANKRD22Q5VYY1 191 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 CC2D2BQ6DHV5 1058 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 CCDC89Q8N998 374 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 AGR3Q8TD06 166 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 CCDC124Q96CT7 223 aaKnown RBP17.69■□□□□ 0.42
SIPA1-201ENST00000394224 IVDP26440 423 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 NLRP11P59045 1033 aaKnown RBP17.69■□□□□ 0.42
SIPA1-201ENST00000394224 MTFR1Q15390 333 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 OTOAQ7RTW8 1153 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 CCDC125Q86Z20 511 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 PDCD7Q8N8D1 485 aaKnown RBP17.69■□□□□ 0.42
SIPA1-201ENST00000394224 CD101Q93033 1021 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 RMDN3Q96TC7 470 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 MXRA8Q9BRK3 442 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 EBF2Q9HAK2 575 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 ACSS2Q9NR19 701 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 RNF19AQ9NV58 838 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 SLC5A4Q9NY91 659 aa17.69■□□□□ 0.42
SIPA1-201ENST00000394224 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.69■□□□□ 0.42
SIPA1-201ENST00000394224 GYG2O15488 501 aa17.68■□□□□ 0.42
SIPA1-201ENST00000394224 TOP3BO95985 862 aaKnown RBP17.68■□□□□ 0.42
SIPA1-201ENST00000394224 DRG2P55039 364 aaKnown RBP17.68■□□□□ 0.42
SIPA1-201ENST00000394224 PLEKHG4Q58EX7 1191 aa17.68■□□□□ 0.42
SIPA1-201ENST00000394224 PPP1R21Q6ZMI0 780 aa17.68■□□□□ 0.42
SIPA1-201ENST00000394224 TCP10LQ8TDR4 215 aa17.68■□□□□ 0.42
SIPA1-201ENST00000394224 SHC3Q92529 594 aa17.68■□□□□ 0.42
SIPA1-201ENST00000394224 P3H4Q92791 437 aa17.68■□□□□ 0.42
SIPA1-201ENST00000394224 SMYD3Q9H7B4 428 aa17.68■□□□□ 0.42
SIPA1-201ENST00000394224 G3BP2Q9UN86 482 aaKnown RBP17.68■□□□□ 0.42
SIPA1-201ENST00000394224 MRPL11Q9Y3B7 192 aaKnown RBP17.68■□□□□ 0.42
SIPA1-201ENST00000394224 IKBKGQ9Y6K9 419 aa17.68■□□□□ 0.42
SIPA1-201ENST00000394224 HLA-DRAP01903 254 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms