RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 SEC13P55735 322 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 RBM10P98175 930 aaKnown RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 YWHAHQ04917 246 aaPredicted RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 FBXO47Q5MNV8 452 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 ZBTB41Q5SVQ8 909 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 MAP3K21Q5TCX8 1036 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 ATF7IP2Q5U623 682 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 TAPT1Q6NXT6 567 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 C4orf50Q6ZRC1 276 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 METTL16Q86W50 562 aaKnown RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 CHPFQ8IZ52 775 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 FBXL6Q8N531 539 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 FSIP1Q8NA03 581 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 SCFD1Q8WVM8 642 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 ZNF830Q96NB3 372 aaPredicted RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 GUCD1Q96NT3 240 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 LRFN3Q9BTN0 628 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 TTPALQ9BTX7 342 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 TARS2Q9BW92 718 aaKnown RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 PHF7Q9BWX1 381 aaPredicted RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 LRRC27Q9C0I9 530 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 BCAS3Q9H6U6 928 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 GPRC5CQ9NQ84 441 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 TMEM161AQ9NX61 479 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 BARHL2Q9NY43 387 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 COL20A1Q9P218 1284 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 SLC27A5Q9Y2P5 690 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 TTLL3Q9Y4R7 772 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 PCDHB6Q9Y5E3 794 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 MRPL42Q9Y6G3 142 aaKnown RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 MCM3APO60318 1980 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 SHROOM3Q8TF72 1996 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 MBL2P11226 248 aaPredicted RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 HOXB8P17481 243 aaPredicted RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 CD58P19256 250 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 U2AF2P26368 475 aaKnown RBP eCLIP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 LIFRP42702 1097 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 PTPN5P54829 565 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 ANO7Q6IWH7 933 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 KIAA1211LQ6NV74 962 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 MAMDC4Q6UXC1 1216 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 ZSCAN30Q86W11 494 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 PIK3R5Q8WYR1 880 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 SLITRK1Q96PX8 696 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 EIF2AK1Q9BQI3 630 aaKnown RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 SYT11Q9BT88 431 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 RNF26Q9BY78 433 aaPredicted RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 GTPBP4Q9BZE4 634 aaKnown RBP4.08□□□□□ -1.76
SMC1B-201ENST00000357450 UBN1Q9NPG3 1134 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 MAD2L2Q9UI95 211 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 MAPK8IP1Q9UQF2 711 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 EPG5Q9HCE0 2579 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 PLXNB3Q9ULL4 1909 aa4.08□□□□□ -1.76
SMC1B-201ENST00000357450 AXIN1O15169 862 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 EPCAMP16422 314 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 GABRR2P28476 465 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 GJB2P29033 226 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 ID4P47928 161 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 NAP1L1P55209 391 aaKnown RBP4.07□□□□□ -1.76
SMC1B-201ENST00000357450 RNASE9P60153 205 aaKnown RBP4.07□□□□□ -1.76
SMC1B-201ENST00000357450 ADCY1Q08828 1119 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 LAMTOR4Q0VGL1 99 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 ADGRE1Q14246 886 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 LPIN1Q14693 890 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 CCDC6Q16204 474 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 ZNF394Q53GI3 561 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 PACS2Q86VP3 889 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 DCP1BQ8IZD4 617 aaKnown RBP4.07□□□□□ -1.76
SMC1B-201ENST00000357450 SPATA32Q96LK8 384 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 FBXL18Q96ME1 805 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 FAM20AQ96MK3 541 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.07□□□□□ -1.76
SMC1B-201ENST00000357450 NT5C3AQ9H0P0 336 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 WNT8AQ9H1J5 351 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 AGO3Q9H9G7 860 aaKnown RBP4.07□□□□□ -1.76
SMC1B-201ENST00000357450 LY9Q9HBG7 655 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 LRRC4Q9HBW1 653 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 STIM2Q9P246 746 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 PLAGL2Q9UPG8 496 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 SYCE3A1L190 88 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 MACROD2A1Z1Q3 448 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 CARNS1A5YM72 827 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 ANKRD62A6NC57 917 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 BECN2A8MW95 431 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 NBNO60934 754 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 ALDH1A2O94788 518 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 MOCS2O96007 188 aaPredicted RBP4.07□□□□□ -1.76
SMC1B-201ENST00000357450 F2P00734 622 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 CIITAP33076 1130 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 IRS1P35568 1242 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 POSTNQ15063 836 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 TCEA2Q15560 299 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 SPRED3Q2MJR0 410 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 ASTE1Q2TB18 679 aaPredicted RBP4.07□□□□□ -1.76
SMC1B-201ENST00000357450 TAF1BQ53T94 588 aaPredicted RBP4.07□□□□□ -1.76
SMC1B-201ENST00000357450 GPR158Q5T848 1215 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 LMBRD2Q68DH5 695 aaPredicted RBP4.07□□□□□ -1.76
SMC1B-201ENST00000357450 DCLRE1AQ6PJP8 1040 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 ITIH5Q86UX2 942 aa4.07□□□□□ -1.76
SMC1B-201ENST00000357450 ZC3H3Q8IXZ2 948 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 556.9 ms