RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 USP17L20D6RJB6 530 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 MAP3K7O43318 606 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 ENTPD3O75355 529 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 CYP2C9P11712 490 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 PRKCIP41743 596 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 USP17L24Q0WX57 530 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 PDCD4Q53EL6 469 aaKnown RBP10.9□□□□□ -0.66
SF3B2-201ENST00000322535 COBLL1Q53SF7 1204 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 USP17L6PQ6QN14 398 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 SH3RF1Q7Z6J0 888 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 BLIDQ8IZY5 108 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
SF3B2-201ENST00000322535 CNOT6LQ96LI5 555 aaKnown RBP10.9□□□□□ -0.66
SF3B2-201ENST00000322535 PACSIN1Q9BY11 444 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 DCLRE1BQ9H816 532 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 KANSL2Q9H9L4 492 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 CLK4Q9HAZ1 481 aaKnown RBP10.9□□□□□ -0.66
SF3B2-201ENST00000322535 MTUS1Q9ULD2 1270 aa10.9□□□□□ -0.66
SF3B2-201ENST00000322535 UTP11Q9Y3A2 253 aaKnown RBP10.9□□□□□ -0.66
SF3B2-201ENST00000322535 ZNF646O15015 1829 aaPredicted RBP10.9□□□□□ -0.67
SF3B2-201ENST00000322535 CCDC169A6NNP5 214 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 SFI1A8K8P3 1242 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 RASA4BC9J798 803 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 TNFRSF10AO00220 468 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 SIPA1L1O43166 1804 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 RASA4O43374 803 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 FGFR4P22455 802 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 EEF1GP26641 437 aaKnown RBP10.89□□□□□ -0.67
SF3B2-201ENST00000322535 RCVRNP35243 200 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 PTGDRQ13258 359 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 LETM2Q2VYF4 491 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 ANKDD1AQ495B1 522 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 ZCWPW2Q504Y3 356 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 FAM83BQ5T0W9 1011 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 FNDC8Q8TC99 324 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 IQCDQ96DY2 449 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 TGS1Q96RS0 853 aaKnown RBP10.89□□□□□ -0.67
SF3B2-201ENST00000322535 FOXP1Q9H334 677 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-201ENST00000322535 ZNF304Q9HCX3 659 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 GIT1Q9Y2X7 761 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 FER1L6Q2WGJ9 1857 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 NID2Q14112 1375 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-201ENST00000322535 TMEM120BA0PK00 339 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 PP2D1A8MPX8 630 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 ARHGAP33O14559 1287 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 APOEP02649 317 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 CCDC174Q6PII3 467 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 LRRC74BQ6ZQY2 392 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 ANKLE1Q8NAG6 615 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 ERLEC1Q96DZ1 483 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 VPS50Q96JG6 964 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 SNX25Q9H3E2 840 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 DNAJC17Q9NVM6 304 aaKnown RBP10.89□□□□□ -0.67
SF3B2-201ENST00000322535 BARHL2Q9NY43 387 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 PCDHA6Q9UN73 950 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 PLAGL2Q9UPG8 496 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 PCDHA8Q9Y5H6 950 aa10.89□□□□□ -0.67
SF3B2-201ENST00000322535 ZNF536O15090 1300 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 CCNB1P14635 433 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 RCAN1P53805 252 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 EIF3BP55884 814 aaKnown RBP10.88□□□□□ -0.67
SF3B2-201ENST00000322535 WASHC5Q12768 1159 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 CNGA3Q16281 694 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 C9orf131Q5VYM1 1079 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 DSTYKQ6XUX3 929 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 TMEM179Q6ZVK1 233 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 CYTH2Q99418 400 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 STK33Q9BYT3 514 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 TBCCD1Q9NVR7 557 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 SNX24Q9Y343 169 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 FOCADQ5VW36 1801 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 KIF13BQ9NQT8 1826 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 CCDC194A0A1B0GVG4 234 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 GRID2IPA4D2P6 1211 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 PSMA7O14818 248 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 OAS1P00973 400 aaKnown RBP10.88□□□□□ -0.67
SF3B2-201ENST00000322535 PRKACBP22694 351 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 TUBA1BP68363 451 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 COG7P83436 770 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 LRRC36Q1X8D7 754 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 TTC38Q5R3I4 469 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 SLC30A10Q6XR72 485 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 TUBA1AQ71U36 451 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 SATL1Q86VE3 508 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 KBTBD2Q8IY47 623 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 AGGF1Q8N302 714 aaeCLIP10.88□□□□□ -0.672e-7■□□□□ 8.2
SF3B2-201ENST00000322535 STARD8Q92502 1023 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 USP6NLQ92738 828 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 STMN2Q93045 179 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 VMP1Q96GC9 406 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 CDK5RAP3Q96JB5 506 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 EGLN2Q96KS0 407 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 CCDC17Q96LX7 622 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 ZNF341Q9BYN7 854 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 CUEDC2Q9H467 287 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 SELENONQ9NZV5 590 aa10.88□□□□□ -0.67
SF3B2-201ENST00000322535 NOC2LQ9Y3T9 749 aaKnown RBP10.88□□□□□ -0.67
SF3B2-201ENST00000322535 GPC6Q9Y625 555 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms