RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 TTC31Q49AM3 519 aaPredicted RBP20.26■□□□□ 0.83
LSM11-201ENST00000286307 EFHC1Q5JVL4 640 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 RUSC1Q9BVN2 902 aa20.26■□□□□ 0.83
LSM11-201ENST00000286307 CINPQ9BW66 212 aaPredicted RBP20.26■□□□□ 0.83
LSM11-201ENST00000286307 MYO1DO94832 1006 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 ASS1P00966 412 aaKnown RBP20.25■□□□□ 0.83
LSM11-201ENST00000286307 HSPA8P11142 646 aaKnown RBP20.25■□□□□ 0.83
LSM11-201ENST00000286307 RALBP11234 206 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 ATXN3P54252 364 aaPredicted RBP20.25■□□□□ 0.83
LSM11-201ENST00000286307 TBCCQ15814 346 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 ANKS3Q6ZW76 656 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 ITIH5Q86UX2 942 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 ATP11CQ8NB49 1132 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 CIPCQ9C0C6 399 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 MTMR12Q9C0I1 747 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 SNTG2Q9NY99 539 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 IFNA8P32881 189 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 CNTN2Q02246 1040 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 DGKZQ13574 1117 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 LZICQ8WZA0 190 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 METTL5Q9NRN9 209 aaKnown RBP20.25■□□□□ 0.83
LSM11-201ENST00000286307 PGK1P00558 417 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 PTPRAP18433 802 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 SHMT1P34896 483 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 SESN3P58005 492 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 MYRIPQ8NFW9 859 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 CHST12Q9NRB3 414 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 THG1LQ9NWX6 298 aaKnown RBP20.25■□□□□ 0.83
LSM11-201ENST00000286307 EPS15L1Q9UBC2 864 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 ARHGAP10A1A4S6 786 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 AMPD2Q01433 879 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 RSRC1Q96IZ7 334 aaKnown RBP20.25■□□□□ 0.83
LSM11-201ENST00000286307 F5H5T6 163 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 SLC26A2P50443 739 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 CSGALNACT1Q8TDX6 532 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 ERLEC1Q96DZ1 483 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 RPRD1AQ96P16 312 aaPredicted RBP20.25■□□□□ 0.83
LSM11-201ENST00000286307 PXDNQ92626 1479 aa20.25■□□□□ 0.83
LSM11-201ENST00000286307 NCK2O43639 380 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 LZTS3O60299 673 aaPredicted RBP20.24■□□□□ 0.83
LSM11-201ENST00000286307 ACOT1Q86TX2 421 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 TLR2O60603 784 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 AKAP5P24588 427 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 LAMTOR4Q0VGL1 99 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 FAM171A1Q5VUB5 890 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 ATG16L1Q676U5 607 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 ZFPM1Q8IX07 1006 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 LRRC43Q8N309 656 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 CCDC195A0A1B0GUA6 201 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 EIF3DO15371 548 aaKnown RBP eCLIP20.24■□□□□ 0.83
LSM11-201ENST00000286307 KRT38O76015 456 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 ENDOD1O94919 500 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 HIST1H2AGP0C0S8 130 aaPredicted RBP20.24■□□□□ 0.83
LSM11-201ENST00000286307 HIST1H2ADP20671 130 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 HIST1H2AHQ96KK5 128 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 HIST1H2AJQ99878 128 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 H2AFJQ9BTM1 129 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 MSCO60682 206 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 DEFB118Q96PH6 123 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 DSEQ9UL01 958 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 OGTO15294 1046 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 ARHGAP25P42331 645 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 FXR2P51116 673 aaKnown RBP eCLIP20.24■□□□□ 0.83
LSM11-201ENST00000286307 MAP3K7CLP57077 242 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 POLD3Q15054 466 aaPredicted RBP20.24■□□□□ 0.83
LSM11-201ENST00000286307 FASTKD1Q53R41 847 aaKnown RBP20.24■□□□□ 0.83
LSM11-201ENST00000286307 PPM1LQ5SGD2 360 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 LMNTD2Q8IXW0 634 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 CLMNQ96JQ2 1002 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 WDCPQ9H6R7 721 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 VCX3AQ9NNX9 186 aa20.24■□□□□ 0.83
LSM11-201ENST00000286307 DDX4Q9NQI0 724 aaKnown RBP20.24■□□□□ 0.83
LSM11-201ENST00000286307 TIMM13Q9Y5L4 95 aaPredicted RBP20.24■□□□□ 0.83
LSM11-201ENST00000286307 NDUFS3O75489 264 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 PDIA2Q13087 525 aaKnown RBP20.23■□□□□ 0.83
LSM11-201ENST00000286307 CXCL17Q6UXB2 119 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 PDGFDQ9GZP0 370 aaPredicted RBP20.23■□□□□ 0.83
LSM11-201ENST00000286307 SMIM24O75264 130 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 FGFR2P21802 821 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 APBA1Q02410 837 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 PDAP1Q13442 181 aaKnown RBP20.23■□□□□ 0.83
LSM11-201ENST00000286307 NLGN2Q8NFZ4 835 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.23■□□□□ 0.83
LSM11-201ENST00000286307 PDCD2LQ9BRP1 358 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 POLR1AO95602 1720 aaPredicted RBP20.23■□□□□ 0.83
LSM11-201ENST00000286307 MX2P20592 715 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 SOX10P56693 466 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 SP100P23497 879 aaPredicted RBP20.23■□□□□ 0.83
LSM11-201ENST00000286307 EFEMP1Q12805 493 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 EPC2Q52LR7 807 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 STK33Q9BYT3 514 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 SUN1O94901 812 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 CCT5P48643 541 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 LLGL2Q6P1M3 1020 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 PDXDC1Q6P996 788 aa20.23■□□□□ 0.83
LSM11-201ENST00000286307 RAP1GAPP47736 663 aa20.22■□□□□ 0.83
LSM11-201ENST00000286307 APOBEC3HQ6NTF7 200 aaKnown RBP20.22■□□□□ 0.83
LSM11-201ENST00000286307 OOSP2Q86WS3 158 aa20.22■□□□□ 0.83
LSM11-201ENST00000286307 TRAPPC12Q8WVT3 735 aa20.22■□□□□ 0.83
LSM11-201ENST00000286307 STN1Q9H668 368 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms