RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 HEY2Q9UBP5 337 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 COMMD3-BMI1R4GMX3 469 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 E5RI56 91 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 BCL10O95999 233 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 ADARP55265 1226 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 LBRQ14739 615 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 RRM2BQ7LG56 351 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 EFCAB1Q9HAE3 211 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 XPO7Q9UIA9 1087 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 M0QYV0 167 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 CNTFP26441 200 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 SLC16A2P36021 539 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 DYNLL1P63167 89 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 CHI3L2Q15782 390 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 RBBP7Q16576 425 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 SNX30Q5VWJ9 437 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 PLEKHA7Q6IQ23 1121 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 UNC45AQ9H3U1 944 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 BTG4Q9NY30 223 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 SMIM31A0A1B0GVY4 71 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 POLBP06746 335 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 WEE2P0C1S8 567 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 GRK2P25098 689 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 TNFRSF8P28908 595 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 EFNA5P52803 228 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 CCNA1P78396 465 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 PDAP1Q13442 181 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 AENQ8WTP8 325 aaKnown RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 CCDC126Q96EE4 140 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 IFT43Q96FT9 208 aa8.6□□□□□ -1.03
APOB-201ENST00000233242 RMND5BQ96G75 393 aaPredicted RBP8.6□□□□□ -1.03
APOB-201ENST00000233242 ANKARQ7Z5J8 1434 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 EIF2B2P49770 351 aaKnown RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 ARID3BQ8IVW6 561 aaPredicted RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 TRIM10Q9UDY6 481 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 RABGEF1Q9UJ41 708 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 ZNF197O14709 1029 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 STIP1P31948 543 aaKnown RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 LAMC2Q13753 1193 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 PDK1Q15118 436 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 MAPK6Q16659 721 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 SLC13A5Q86YT5 568 aaPredicted RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 BBS2Q9BXC9 721 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 DMAP1Q9NPF5 467 aaPredicted RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 SLC8A2Q9UPR5 921 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 PCDHB2Q9Y5E7 798 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 C3orf70A6NLC5 250 aaPredicted RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 C6orf10Q5SRN2 563 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 BAZ2BQ9UIF8 2168 aaKnown RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 TBX3O15119 743 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 TRAPPC3O43617 180 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 HADHAP40939 763 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 KCNK10P57789 538 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 DNAJC3Q13217 504 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 GPD1LQ8N335 351 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 GINS4Q9BRT9 223 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 PHF20Q9BVI0 1012 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 RNPEPL1Q9HAU8 725 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 RALBP11234 206 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 PTK2BQ14289 1009 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 FUKQ8N0W3 1084 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 FAM81AQ8TBF8 368 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 NR1H4Q96RI1 486 aaPredicted RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 A0A087WXM4 84 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 DENND3A2RUS2 1198 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 QARSP47897 775 aaKnown RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 UBE2SQ16763 222 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 AGBL1Q96MI9 1066 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 NAT9Q9BTE0 207 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 FANCEQ9HB96 536 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 HAO1Q9UJM8 370 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 BICRAQ9NZM4 1560 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 PNMA8CA0A1B0GUJ8 204 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 COMTP21964 271 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 PHKA2P46019 1235 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 MAGEC3Q8TD91 643 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 FAM162AQ96A26 154 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 TADA1Q96BN2 335 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 MAGED2Q9UNF1 606 aaPredicted RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 BBOX1O75936 387 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 GSTA3Q16772 222 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 LPCAT2Q7L5N7 544 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 NUP93Q8N1F7 819 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 APOL4Q9BPW4 351 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 BTBD10Q9BSF8 475 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 C1orf50Q9BV19 199 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 PXDNLA1KZ92 1463 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 TMEM191CA6NGB0 347 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 SLC4A1P02730 911 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 TMEM47Q9BQJ4 181 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 P4HBP07237 508 aaKnown RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 PSMC5P62195 406 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 CCDC60Q8IWA6 550 aaPredicted RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 OR6P1Q8NGX9 317 aa8.59□□□□□ -1.03
APOB-201ENST00000233242 NMD3Q96D46 503 aaKnown RBP8.59□□□□□ -1.03
APOB-201ENST00000233242 ZSCAN9O15535 394 aaPredicted RBP8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms