RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PLEKHA8Q96JA3 519 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 OLFML3Q9NRN5 406 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 RAB6BQ9NRW1 208 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 AXIN2Q9Y2T1 843 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 TTLL13PA6NNM8 815 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 SLC25A27O95847 323 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 NCAM1P13591 858 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 GUF1Q8N442 669 aaKnown RBP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 CHUKO15111 745 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 FKBP9O95302 570 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 SNRNP35Q16560 246 aaKnown RBP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 FKBP9P1Q75LS8 142 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 SLC35G2Q8TBE7 412 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 ZMAT2Q96NC0 199 aaKnown RBP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 REEP2Q9BRK0 252 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 NT5C1AQ9BXI3 368 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 APEX2Q9UBZ4 518 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 GSNP06396 782 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 RARS2Q5T160 578 aaKnown RBP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 HORMAD1Q86X24 394 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 DPF3Q92784 378 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 BPIFA3Q9BQP9 254 aa13.87□□□□□ -0.19
COL1A1-201ENST00000225964 STN1Q9H668 368 aaKnown RBP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 METTL5Q9NRN9 209 aaKnown RBP13.87□□□□□ -0.19
COL1A1-201ENST00000225964 ODC1P11926 461 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 PBLDP30039 288 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ACADSBP45954 432 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 RGS4P49798 205 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ATP2C1P98194 919 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 NOTUMQ6P988 496 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 C10orf53Q8N6V4 93 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 CRAMP1Q96RY5 1269 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 NDUFB5O43674 189 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 PCSK1P29120 753 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 PIGHQ14442 188 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 KCNB1Q14721 858 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 RNPC3Q96LT9 517 aaKnown RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 MTMR4Q9NYA4 1195 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 KLK14Q9P0G3 267 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 GMNCA6NCL1 334 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 GUCY1A2P33402 732 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 CLEC10AQ8IUN9 316 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ERAP1Q9NZ08 941 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 PDXKO00764 312 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 NDUFB10O96000 172 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 TCF3P15923 654 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 CHRM3P20309 590 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ALX1Q15699 326 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ATL2Q8NHH9 583 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 TSC22D3Q99576 134 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 BRD8Q9H0E9 1235 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 PCMTD2Q9NV79 361 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 MAP10Q9P2G4 905 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ANO9A1A5B4 782 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 TEX33O43247 280 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 MLNP12872 115 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 MRPL28Q13084 256 aaKnown RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 TP53BP2Q13625 1128 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 AMHR2Q16671 573 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 LRRC23Q53EV4 343 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 NSUN4Q96CB9 384 aaKnown RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 MAGEB10Q96LZ2 347 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 WDR35Q9P2L0 1181 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 TTC26A0AVF1 554 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 CFAP99D6REC4 459 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 TBC1D4O60343 1298 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 H2AFYO75367 372 aaKnown RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 CYP2C19P33261 490 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 HSPA9P38646 679 aaKnown RBP13.86□□□□□ -0.19
COL1A1-201ENST00000225964 BTKQ06187 659 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ERAP2Q6P179 960 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ARHGAP18Q8N392 663 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 SLITRK1Q96PX8 696 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 ISCA1Q9BUE6 129 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 COLEC11Q9BWP8 271 aa13.86□□□□□ -0.19
COL1A1-201ENST00000225964 AK9Q5TCS8 1911 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 WEE2P0C1S8 567 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 CRLS1Q9UJA2 301 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 CDYLQ9Y232 598 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 EIF4E1BA6NMX2 242 aaKnown RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 FOXN1O15353 648 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 CYTH3O43739 400 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 SRP72O76094 671 aaKnown RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 RHOBTB1O94844 696 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 CCDC159P0C7I6 412 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 HIST2H2ACQ16777 129 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 DEPDC1Q5TB30 811 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 HIST2H2AA3Q6FI13 130 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 MS4A14Q96JA4 679 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 TRABDQ9H4I3 376 aa13.85□□□□□ -0.19
COL1A1-201ENST00000225964 NFKBIL1Q9UBC1 381 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 ZC3H7BQ9UGR2 993 aaKnown RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 PRG3Q9Y2Y8 225 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 ATP1A1P05023 1023 aaKnown RBP13.85□□□□□ -0.19
COL1A1-201ENST00000225964 STAG3L1P0CL83 205 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms